WormBase Tree Display for Gene: WBGene00017025
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| WBGene00017025 | SMap | S_parent | Sequence | D1037 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | D1037.1 | |||||||
| Molecular_name | D1037.1 | ||||||||
| D1037.1.1 | |||||||||
| CE20620 | |||||||||
| Other_name | CELE_D1037.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | D1037.1 | ||||||||
| DB_info | Database | AceView | gene | 1E257 | |||||
| WormQTL | gene | WBGene00017025 | |||||||
| WormFlux | gene | WBGene00017025 | |||||||
| NDB | locus_tag | CELE_D1037.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017025|UniProtKB=Q9TYS1 | |||||||
| family | PTHR46528 | ||||||||
| NCBI | gene | 171936 | |||||||
| RefSeq | protein | NM_058799.6 | |||||||
| TREEFAM | TREEFAM_ID | TF343062 | |||||||
| TrEMBL | UniProtAcc | Q9TYS1 | |||||||
| UniProt_GCRP | UniProtAcc | Q9TYS1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (104) | |||||||||
| Strain | WBStrain00032186 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00097567 | ||||||||
| 00097568 | |||||||||
| 00097569 | |||||||||
| 00097570 | |||||||||
| 00122518 | |||||||||
| 00122519 | |||||||||
| 00122520 | |||||||||
| 00122521 | |||||||||
| Ortholog (33) | |||||||||
| Structured_description | Automated_description | Predicted to enable RNA binding activity. Predicted to be involved in regulation of mRNA splicing, via spliceosome. Human ortholog(s) of this gene implicated in congenital anomalies of kidney and urinary tract syndrome with or without hearing loss, abnormal ears, or developmental delay. Is an ortholog of human SON (SON DNA and RNA binding protein). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0112359 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11183) | ||||
| Molecular_info | Corresponding_CDS | D1037.1 | |||||||
| Corresponding_transcript | D1037.1.1 | ||||||||
| Other_sequence (29) | |||||||||
| Associated_feature | WBsf643150 | ||||||||
| WBsf643151 | |||||||||
| WBsf656125 | |||||||||
| WBsf983202 | |||||||||
| WBsf217418 | |||||||||
| WBsf217419 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00117065 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00030331 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00000684 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062180 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003266 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00085113 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043362 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015921 | ||||||||
| Expr1037316 | |||||||||
| Expr1147347 | |||||||||
| Expr2002020 | |||||||||
| Expr2020243 | |||||||||
| Drives_construct | WBCnstr00027628 | ||||||||
| Construct_product | WBCnstr00027628 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (80) | |||||||||
| Interaction (22) | |||||||||
| Map_info | Positive | Positive_clone | D1037 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | -2.89977 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00046432 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064339 | |||||||||
| Method | Gene |
