WormBase Tree Display for Gene: WBGene00017016
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WBGene00017016 | SMap | S_parent | Sequence | D1014 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | snap | ||||||
Allele (39) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (12) | |||||||
Contained_in_operon | CEOP5180 | ||||||
Ortholog (48) | |||||||
Paralog | WBGene00013345 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
WBGene00044794 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
Structured_description | Automated_description | Predicted to enable soluble NSF attachment protein activity and syntaxin binding activity. Involved in IRE1-mediated unfolded protein response. Predicted to be located in membrane. Predicted to be part of SNARE complex. Human ortholog(s) of this gene implicated in Alzheimer's disease; Down syndrome; and developmental and epileptic encephalopathy 107. Is an ortholog of human NAPA (NSF attachment protein alpha) and NAPB (NSF attachment protein beta). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0070393 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15751) | ||
DOID:10652 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15751) | ||||
DOID:14250 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15751) | ||||
Molecular_info | Corresponding_CDS | D1014.3a | |||||
D1014.3b | |||||||
Corresponding_CDS_history | D1014.3:wp142 | ||||||
Corresponding_transcript | D1014.3a.1 | ||||||
D1014.3b.1 | |||||||
D1014.3b.2 | |||||||
D1014.3b.3 | |||||||
Other_sequence (35) | |||||||
Associated_feature | WBsf646987 | ||||||
WBsf646988 | |||||||
WBsf661465 | |||||||
WBsf661466 | |||||||
WBsf981966 | |||||||
WBsf1000585 | |||||||
WBsf232064 | |||||||
WBsf232065 | |||||||
Experimental_info (7) | |||||||
Map_info | Map | V | Position | 1.04508 | Error | 0.011611 | |
Positive | Positive_clone | D1014 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |