WormBase Tree Display for Gene: WBGene00017009
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| WBGene00017009 | SMap | S_parent | Sequence | D1007 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | idpp-10 | Person_evidence | WBPerson1820 | |||||
| Sequence_name | D1007.13 | ||||||||
| Molecular_name | D1007.13a | ||||||||
| D1007.13a.1 | |||||||||
| CE40196 | |||||||||
| D1007.13b | |||||||||
| CE40449 | |||||||||
| D1007.13b.1 | |||||||||
| Other_name | CELE_D1007.13 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | idpp-10 | ||||||||
| DB_info | Database | AceView | gene | 1F135 | |||||
| WormQTL | gene | WBGene00017009 | |||||||
| WormFlux | gene | WBGene00017009 | |||||||
| NDB | locus_tag | CELE_D1007.13 | |||||||
| NCBI | gene | 183890 | |||||||
| RefSeq | protein | NM_001379856.1 | |||||||
| NM_001083131.6 | |||||||||
| TrEMBL | UniProtAcc | O01875 | |||||||
| A0A9S6 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A9S6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 04 Jan 2022 10:41:14 | WBPerson1983 | Name_change | CGC_name | idpp-10 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | idpp | ||||||||
| Allele (29) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (21) | |||||||||
| Structured_description | Automated_description | Enriched in anterior hypodermis; arcade cell; muscle cell; and neurons based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and age-1 based on microarray and RNA-seq studies. Is affected by eleven chemicals including multi-walled carbon nanotube; D-glucose; and Zidovudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | D1007.13a | |||||||
| D1007.13b | |||||||||
| Corresponding_CDS_history | D1007.13:wp157 | ||||||||
| D1007.13:wp165 | |||||||||
| Corresponding_transcript | D1007.13a.1 | ||||||||
| D1007.13b.1 | |||||||||
| Other_sequence | CRC01720_1 | ||||||||
| CR05251 | |||||||||
| Associated_feature | WBsf643220 | ||||||||
| WBsf983439 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00030305 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043323 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003255 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025175 | ||||||||
| Expr1037307 | |||||||||
| Expr1147301 | |||||||||
| Expr2002000 | |||||||||
| Expr2020224 | |||||||||
| Drives_construct | WBCnstr00027641 | ||||||||
| Construct_product | WBCnstr00027641 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (115) | |||||||||
| Interaction | WBInteraction000243322 | ||||||||
| WBInteraction000256820 | |||||||||
| WBInteraction000325793 | |||||||||
| WBInteraction000389324 | |||||||||
| WBInteraction000450975 | |||||||||
| Map_info | Map | I | Position | -1.04886 | |||||
| Positive | Positive_clone | D1007 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00064648 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
