WormBase Tree Display for Gene: WBGene00016974
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WBGene00016974 | SMap | S_parent | Sequence | C56E6 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | lron-15 | Person_evidence | WBPerson260 | |||
WBPerson637 | |||||||
Sequence_name | C56E6.6 | ||||||
Molecular_name | C56E6.6 | ||||||
C56E6.6.1 | |||||||
CE46222 | |||||||
Other_name | CELE_C56E6.6 | Accession_evidence | NDB | BX284602 | |||
Public_name | lron-15 | ||||||
DB_info | Database | AceView | gene | 2G832 | |||
WormQTL | gene | WBGene00016974 | |||||
WormFlux | gene | WBGene00016974 | |||||
NDB | locus_tag | CELE_C56E6.6 | |||||
Panther | gene | CAEEL|WormBase=WBGene00016974|UniProtKB=Q18902 | |||||
family | PTHR45617 | ||||||
NCBI | gene | 174079 | |||||
RefSeq | protein | NM_062921.6 | |||||
TrEMBL | UniProtAcc | Q18902 | |||||
UniProt_GCRP | UniProtAcc | Q18902 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | lron | ||||||
Allele (48) | |||||||
Strain | WBStrain00033089 | ||||||
RNASeq_FPKM (74) | |||||||
Ortholog (36) | |||||||
Paralog (11) | |||||||
Structured_description | Automated_description | Enriched in ADE sheath cell; head ganglion; muscle cell; and neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including rrf-3; eat-2; and sir-2.1 based on microarray and RNA-seq studies. Is affected by eleven chemicals including 1-methylnicotinamide; stavudine; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Leucine-rich repeat; Leucine-rich repeat domain superfamily; Leucine rich repeat; and Leucine-rich repeat, typical subtype. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C56E6.6 | |||||
Corresponding_CDS_history | C56E6.6:wp130 | ||||||
C56E6.6:wp227 | |||||||
Corresponding_transcript | C56E6.6.1 | ||||||
Other_sequence | JI164988.1 | ||||||
Associated_feature | WBsf665621 | ||||||
WBsf988198 | |||||||
WBsf1012397 | |||||||
WBsf223195 | |||||||
WBsf223196 | |||||||
WBsf223197 | |||||||
Experimental_info | RNAi_result | WBRNAi00030208 | Inferred_automatically | RNAi_primary | |||
WBRNAi00001815 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00043281 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00012468 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1025366 | ||||||
Expr1037285 | |||||||
Expr1147259 | |||||||
Expr2013273 | |||||||
Expr2031504 | |||||||
Drives_construct | WBCnstr00027665 | ||||||
Construct_product | WBCnstr00027665 | ||||||
Microarray_results (18) | |||||||
Expression_cluster (148) | |||||||
Interaction | WBInteraction000170047 | ||||||
WBInteraction000193387 | |||||||
WBInteraction000407720 | |||||||
Map_info (3) | |||||||
Reference | WBPaper00017947 | ||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |