WormBase Tree Display for Gene: WBGene00016917
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| WBGene00016917 | SMap | S_parent | Sequence | C54E4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C54E4.1 | |||||||
| Molecular_name | C54E4.1 | ||||||||
| C54E4.1.1 | |||||||||
| CE16943 | |||||||||
| Other_name | CELE_C54E4.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | C54E4.1 | ||||||||
| DB_info | Database | AceView | gene | 4C937 | |||||
| WormQTL | gene | WBGene00016917 | |||||||
| WormFlux | gene | WBGene00016917 | |||||||
| NDB | locus_tag | CELE_C54E4.1 | |||||||
| NCBI | gene | 183788 | |||||||
| RefSeq | protein | NM_067772.2 | |||||||
| TREEFAM | TREEFAM_ID | TF319045 | |||||||
| TrEMBL | UniProtAcc | O44470 | |||||||
| UniProt_GCRP | UniProtAcc | O44470 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (53) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (20) | |||||||||
| Structured_description | Automated_description | Enriched in lateral ganglion; neurons; and ventral nerve cord based on tiling array; single-cell RNA-seq; RNA-seq; and microarray studies. Is affected by several genes including pgl-1; prg-1; and nhr-25 based on RNA-seq and microarray studies. Is affected by cholesterol; Chlorpyrifos; and Microcystin-LR based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C54E4.1 | |||||||
| Corresponding_transcript | C54E4.1.1 | ||||||||
| Associated_feature | WBsf995632 | ||||||||
| WBsf995633 | |||||||||
| WBsf995634 | |||||||||
| WBsf1016867 | |||||||||
| WBsf1016868 | |||||||||
| WBsf1016869 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00012396 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043154 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030145 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014201 | ||||||||
| Expr1147130 | |||||||||
| Expr2001924 | |||||||||
| Expr2020147 | |||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (54) | |||||||||
| Interaction | WBInteraction000172053 | ||||||||
| WBInteraction000236271 | |||||||||
| WBInteraction000412559 | |||||||||
| WBInteraction000434495 | |||||||||
| Map_info | Positive | Positive_clone | C54E4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | -9.43228 | |||||||
| Method | Gene |
