WormBase Tree Display for Gene: WBGene00016871
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| WBGene00016871 | SMap | S_parent | Sequence | C52B11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | inso-1 | Person_evidence | WBPerson242 | |||||
| Sequence_name | C52B11.2 | ||||||||
| Molecular_name | C52B11.2 | ||||||||
| C52B11.2.1 | |||||||||
| CE50310 | |||||||||
| C52B11.2.2 | |||||||||
| Other_name | tag-303 | ||||||||
| CELE_C52B11.2 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | inso-1 | ||||||||
| DB_info | Database | AceView | gene | XB927 | |||||
| WormQTL | gene | WBGene00016871 | |||||||
| WormFlux | gene | WBGene00016871 | |||||||
| NDB | locus_tag | CELE_C52B11.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016871|UniProtKB=Q18776 | |||||||
| family | PTHR14958 | ||||||||
| NCBI | gene | 180473 | |||||||
| RefSeq | protein | NM_075838.6 | |||||||
| TrEMBL | UniProtAcc | Q18776 | |||||||
| UniProt_GCRP | UniProtAcc | Q18776 | |||||||
| OMIM | gene | 616386 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Apr 2005 11:55:18 | WBPerson2970 | Name_change | CGC_name | tag-303 | ||||
| 3 | 16 Apr 2013 17:08:13 | WBPerson2970 | Name_change | CGC_name | inso-1 | ||||
| Other_name | tag-303 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | inso | ||||||||
| Allele (154) | |||||||||
| Strain | WBStrain00036082 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00062226 | ||||||||
| 00062227 | |||||||||
| 00062228 | |||||||||
| 00062229 | |||||||||
| 00062230 | |||||||||
| 00062231 | |||||||||
| 00062232 | |||||||||
| 00062233 | |||||||||
| 00122387 | |||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00020721 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Structured_description | Automated_description | Predicted to enable cullin family protein binding activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Located in cell junction and striated muscle dense body. Human ortholog(s) of this gene implicated in myoclonic dystonia 26. Is an ortholog of human KCTD5 (potassium channel tetramerization domain containing 5). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0090036 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:25705) | ||||
| Molecular_info | Corresponding_CDS | C52B11.2 | |||||||
| Corresponding_CDS_history | C52B11.2:wp245 | ||||||||
| Corresponding_transcript | C52B11.2.1 | ||||||||
| C52B11.2.2 | |||||||||
| Other_sequence (33) | |||||||||
| Associated_feature | WBsf662467 | ||||||||
| WBsf979063 | |||||||||
| WBsf1004006 | |||||||||
| WBsf1004007 | |||||||||
| WBsf1004008 | |||||||||
| WBsf1004009 | |||||||||
| WBsf1022248 | |||||||||
| WBsf1022249 | |||||||||
| WBsf1022250 | |||||||||
| WBsf1022251 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00012289 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00030070 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043005 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00109807 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00109760 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00081079 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00109713 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00093010 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00109666 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9369 | ||||||||
| Expr1026749 | |||||||||
| Expr1037239 | |||||||||
| Expr1146969 | |||||||||
| Expr2012782 | |||||||||
| Expr2031021 | |||||||||
| Construct_product | WBCnstr00013934 | ||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (107) | |||||||||
| Interaction (127) | |||||||||
| Map_info | Map | X | Position | -18.4384 | Error | 0.013952 | |||
| Positive | Positive_clone | C52B11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5245 | |||||||
| 5551 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00034662 | ||||||||
| WBPaper00038444 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00045634 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
