WormBase Tree Display for Gene: WBGene00016846
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| WBGene00016846 | SMap | S_parent | Sequence | C50F7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C50F7.6 | |||||||
| Molecular_name | C50F7.6a | ||||||||
| C50F7.6a.1 | |||||||||
| CE04244 | |||||||||
| C50F7.6b | |||||||||
| CE49572 | |||||||||
| C50F7.6b.1 | |||||||||
| Other_name | CELE_C50F7.6 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | C50F7.6 | ||||||||
| DB_info | Database | AceView | gene | 4I486 | |||||
| WormQTL | gene | WBGene00016846 | |||||||
| WormFlux | gene | WBGene00016846 | |||||||
| NDB | locus_tag | CELE_C50F7.6 | |||||||
| NCBI | gene | 177553 | |||||||
| RefSeq | protein | NM_001380340.1 | |||||||
| NM_068861.6 | |||||||||
| TrEMBL | UniProtAcc | Q18750 | |||||||
| W6RXR9 | |||||||||
| UniProt_GCRP | UniProtAcc | Q18750 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (37) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (41) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABplpppaaa; AFD; Caapa; PVP; and body wall musculature based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and eat-2 based on microarray; RNA-seq; and tiling array studies. Is affected by eight chemicals including Zidovudine; Psoralens; and Sirolimus based on RNA-seq and microarray studies. Is an ortholog of human PDZRN4 (PDZ domain containing ring finger 4). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C50F7.6a | |||||||
| C50F7.6b | |||||||||
| Corresponding_transcript | C50F7.6a.1 | ||||||||
| C50F7.6b.1 | |||||||||
| Other_sequence | JI167060.1 | ||||||||
| EY466228.1 | |||||||||
| ACC13405_1 | |||||||||
| Oden_isotig22905 | |||||||||
| JO470105.1 | |||||||||
| Dviv_isotig18349 | |||||||||
| Acan_isotig09696 | |||||||||
| EY469978.1 | |||||||||
| Associated_feature | WBsf997041 | ||||||||
| WBsf1017759 | |||||||||
| WBsf230315 | |||||||||
| WBsf230316 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00012245 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00030054 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042958 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013672 | ||||||||
| Expr1037229 | |||||||||
| Expr1146925 | |||||||||
| Expr2001842 | |||||||||
| Expr2020068 | |||||||||
| Drives_construct | WBCnstr00027758 | ||||||||
| Construct_product | WBCnstr00027758 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (118) | |||||||||
| Interaction | WBInteraction000547565 | ||||||||
| Map_info | Positive | Positive_clone | C50F7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 3.44882 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
