WormBase Tree Display for Gene: WBGene00016842
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| WBGene00016842 | SMap | S_parent | Sequence | C50F7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | npr-35 | Paper_evidence | WBPaper00041860 | |||||
| Person_evidence | WBPerson260 | ||||||||
| WBPerson11490 | |||||||||
| Sequence_name | C50F7.1 | ||||||||
| Molecular_name | C50F7.1b | ||||||||
| C50F7.1b.1 | |||||||||
| CE54589 | |||||||||
| Other_name | sifr=1 | Person_evidence | WBPerson11490 | ||||||
| CELE_C50F7.1 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | npr-35 | ||||||||
| DB_info | Database | AceView | gene | 4I513 | |||||
| WormQTL | gene | WBGene00016842 | |||||||
| WormFlux | gene | WBGene00016842 | |||||||
| NDB | locus_tag | CELE_C50F7.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016842|UniProtKB=Q7YXG8 | |||||||
| family | PTHR24238 | ||||||||
| NCBI | gene | 183681 | |||||||
| RefSeq | protein | NM_001027917.6 | |||||||
| TREEFAM | TREEFAM_ID | TF316712 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Jan 2013 14:59:12 | WBPerson2970 | Name_change | CGC_name | npr-35 | ||||
| 3 | 13 Oct 2023 01:37:05 | WBPerson51134 | Name_change | CGC_name | npr-35 | ||||
| Other_name | sifr=1 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | npr | ||||||||
| Allele (23) | |||||||||
| Strain | WBStrain00037384 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00082875 | ||||||||
| 00082876 | |||||||||
| 00082877 | |||||||||
| 00082878 | |||||||||
| 00082879 | |||||||||
| 00082880 | |||||||||
| 00082881 | |||||||||
| 00122370 | |||||||||
| 00122371 | |||||||||
| 00122372 | |||||||||
| Ortholog (35) | |||||||||
| Paralog (13) | |||||||||
| Structured_description | Automated_description | Predicted to enable neuropeptide receptor activity. Predicted to be involved in neuropeptide signaling pathway. Predicted to be located in membrane. Expressed in AIYL and AIYR. Is an ortholog of human NPFFR1 (neuropeptide FF receptor 1) and NPFFR2 (neuropeptide FF receptor 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C50F7.1b | |||||||
| Corresponding_CDS_history | C50F7.1:wp96 | ||||||||
| C50F7.1a:wp241 | |||||||||
| C50F7.1b:wp289 | |||||||||
| Corresponding_transcript | C50F7.1b.1 | ||||||||
| Corresponding_transcript_history | C50F7.1a:wp289 | ||||||||
| Other_sequence | Tcir_isotig06703 | ||||||||
| NB06951 | |||||||||
| Dviv_isotig18828 | |||||||||
| Dviv_isotig18829 | |||||||||
| JI181302.1 | |||||||||
| NBC03936_1 | |||||||||
| Associated_feature | WBsf646111 | ||||||||
| WBsf997044 | |||||||||
| WBsf228572 | |||||||||
| WBsf228573 | |||||||||
| Experimental_info | RNAi_result (18) | ||||||||
| Expr_pattern | Expr10062 | ||||||||
| Expr1021967 | |||||||||
| Expr1146919 | |||||||||
| Expr2014422 | |||||||||
| Expr2032663 | |||||||||
| Drives_construct | WBCnstr00015034 | ||||||||
| WBCnstr00027761 | |||||||||
| Construct_product | WBCnstr00027761 | ||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (94) | |||||||||
| Interaction (11) | |||||||||
| Map_info | Map | IV | Position | 3.46542 | |||||
| Positive | Positive_clone | C50F7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00055090 | ||||||||
| WBPaper00064652 | |||||||||
| WBPaper00065946 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
