WormBase Tree Display for Gene: WBGene00016828
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WBGene00016828 | SMap | S_parent | Sequence | C50E10 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | sre-52 | Person_evidence | WBPerson522 | |||
Sequence_name | C50E10.5 | ||||||
Molecular_name | C50E10.5 | ||||||
C50E10.5.1 | |||||||
CE38057 | |||||||
Other_name | CELE_C50E10.5 | Accession_evidence | NDB | BX284602 | |||
Public_name | sre-52 | ||||||
DB_info | Database | AceView | gene | 2M621 | |||
WormQTL | gene | WBGene00016828 | |||||
WormFlux | gene | WBGene00016828 | |||||
NDB | locus_tag | CELE_C50E10.5 | |||||
Panther | gene | CAEEL|WormBase=WBGene00016828|UniProtKB=A3QMA3 | |||||
family | PTHR47757 | ||||||
NCBI | gene | 183666 | |||||
RefSeq | protein | NM_064219.2 | |||||
TREEFAM | TREEFAM_ID | TF316213 | |||||
TrEMBL | UniProtAcc | A3QMA3 | |||||
UniProt_GCRP | UniProtAcc | A3QMA3 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | sre | ||||||
Allele (76) | |||||||
Strain | WBStrain00001969 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00004339 | ||||||
00004340 | |||||||
00122352 | |||||||
00122353 | |||||||
Ortholog (14) | |||||||
Paralog (46) | |||||||
Structured_description | Automated_description | Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. Expressed in PVT. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C50E10.5 | |||||
Corresponding_CDS_history | C50E10.5:wp138 | ||||||
Corresponding_transcript | C50E10.5.1 | ||||||
Associated_feature | WBsf658306 | ||||||
Experimental_info | RNAi_result | WBRNAi00023686 | Inferred_automatically | RNAi_primary | |||
WBRNAi00023100 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00023974 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00012216 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00023174 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00042902 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr5554 | ||||||
Expr14046 | |||||||
Expr1017273 | |||||||
Expr1146874 | |||||||
Expr2016305 | |||||||
Expr2034531 | |||||||
Drives_construct | WBCnstr00002754 | ||||||
WBCnstr00027773 | |||||||
Construct_product | WBCnstr00027773 | ||||||
Microarray_results (17) | |||||||
Expression_cluster (25) | |||||||
SAGE_tag | SAGE:ggataatttt | Strand | Sense | ||||
Unambiguously_mapped | |||||||
SAGE:aattttttta | Strand | Antisense | |||||
Interaction | WBInteraction000182771 | ||||||
WBInteraction000260445 | |||||||
WBInteraction000283798 | |||||||
WBInteraction000320179 | |||||||
WBInteraction000385829 | |||||||
Map_info | Map | II | Position | 8.3542 | Error | 0.077558 | |
Positive | Positive_clone | C50E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |