WormBase Tree Display for Gene: WBGene00016827
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| WBGene00016827 | SMap | S_parent | Sequence | C50E10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | sre-53 | Person_evidence | WBPerson522 | |||||
| Sequence_name | C50E10.3 | ||||||||
| Molecular_name | C50E10.3 | ||||||||
| C50E10.3.1 | |||||||||
| CE38056 | |||||||||
| Other_name | CELE_C50E10.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | sre-53 | ||||||||
| DB_info | Database | AceView | gene | 2M610 | |||||
| WormQTL | gene | WBGene00016827 | |||||||
| WormFlux | gene | WBGene00016827 | |||||||
| NDB | locus_tag | CELE_C50E10.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016827|UniProtKB=A3QMA1 | |||||||
| family | PTHR47757 | ||||||||
| NCBI | gene | 183665 | |||||||
| RefSeq | protein | NM_064215.2 | |||||||
| TREEFAM | TREEFAM_ID | TF316213 | |||||||
| TrEMBL | UniProtAcc | A3QMA1 | |||||||
| UniProt_GCRP | UniProtAcc | A3QMA1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 18 Jan 2005 14:50:06 | WBPerson2970 | Name_change | CGC_name | sre-53 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sre | ||||||||
| Allele (72) | |||||||||
| Strain | WBStrain00002063 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00004337 | ||||||||
| 00004338 | |||||||||
| 00122350 | |||||||||
| 00122351 | |||||||||
| Ortholog (16) | |||||||||
| Paralog (45) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. Expressed in head. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C50E10.3 | |||||||
| Corresponding_CDS_history | C50E10.3:wp138 | ||||||||
| Corresponding_transcript | C50E10.3.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00012214 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00042899 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042900 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr5553 | ||||||||
| Expr1013076 | |||||||||
| Expr1146872 | |||||||||
| Expr2016306 | |||||||||
| Expr2034532 | |||||||||
| Drives_construct | WBCnstr00002847 | ||||||||
| WBCnstr00027774 | |||||||||
| Construct_product | WBCnstr00027774 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (22) | |||||||||
| Interaction | WBInteraction000193831 | ||||||||
| WBInteraction000345502 | |||||||||
| WBInteraction000399146 | |||||||||
| WBInteraction000410349 | |||||||||
| Map_info | Map | II | Position | 7.9401 | Error | 0.027492 | |||
| Positive | Positive_clone | C50E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
