WormBase Tree Display for Gene: WBGene00016790
expand all nodes | collapse all nodes | view schema
| WBGene00016790 | SMap | S_parent | Sequence | C49H3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C49H3.3 | |||||||
| Molecular_name | C49H3.3 | ||||||||
| C49H3.3.1 | |||||||||
| CE04229 | |||||||||
| C49H3.3.2 | |||||||||
| Other_name | CELE_C49H3.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | C49H3.3 | ||||||||
| DB_info | Database | AceView | gene | 4I689 | |||||
| WormQTL | gene | WBGene00016790 | |||||||
| WormFlux | gene | WBGene00016790 | |||||||
| NDB | locus_tag | CELE_C49H3.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016790|UniProtKB=Q9GYQ6 | |||||||
| family | PTHR34253 | ||||||||
| NCBI | gene | 177582 | |||||||
| RefSeq | protein | NM_068920.4 | |||||||
| TREEFAM | TREEFAM_ID | TF314654 | |||||||
| TrEMBL | UniProtAcc | Q9GYQ6 | |||||||
| UniProt_GCRP | UniProtAcc | Q9GYQ6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (11) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00092903 | ||||||||
| 00092904 | |||||||||
| 00092905 | |||||||||
| Ortholog (30) | |||||||||
| Structured_description | Automated_description | Predicted to enable basal RNA polymerase II transcription machinery binding activity. Predicted to be involved in dendrite extension. Predicted to be located in nucleolus. Is an ortholog of human LLPH (LLP homolog, long-term synaptic facilitation factor). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C49H3.3 | |||||||
| Corresponding_transcript | C49H3.3.1 | ||||||||
| C49H3.3.2 | |||||||||
| Other_sequence | CJC00825_1 | ||||||||
| Hbac_isotig03928 | |||||||||
| EX913236.1 | |||||||||
| CRC07662_1 | |||||||||
| HBC06772_1 | |||||||||
| EX010171.1 | |||||||||
| CBC10536_1 | |||||||||
| ES412953.1 | |||||||||
| Associated_feature | WBsf646126 | ||||||||
| WBsf646127 | |||||||||
| WBsf997080 | |||||||||
| WBsf228597 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00042838 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00029998 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012165 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022818 | ||||||||
| Expr1037205 | |||||||||
| Expr1146815 | |||||||||
| Expr2001791 | |||||||||
| Expr2020018 | |||||||||
| Drives_construct | WBCnstr00027802 | ||||||||
| Construct_product | WBCnstr00027802 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (114) | |||||||||
| Interaction | WBInteraction000255723 | ||||||||
| WBInteraction000324760 | |||||||||
| WBInteraction000553280 | |||||||||
| WBInteraction000570368 | |||||||||
| WBInteraction000578060 | |||||||||
| Map_info | Positive | Positive_clone | C49H3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 3.49819 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
