WormBase Tree Display for Gene: WBGene00016779

WBGene00016779 SMap: S_parent: Sequence: C49D10
  Identity: Version: 2
    Name: CGC_name: sdz-7 Paper_evidence: WBPaper00024645
          Person_evidence: WBPerson374
      Sequence_name: C49D10.11
      Molecular_name: C49D10.11
        C49D10.11.1
        CE29230
      Other_name: CELE_C49D10.11 Accession_evidence: NDB BX284602
      Public_name: sdz-7
    DB_info: Database: AceView gene 2E166
        WormQTL gene WBGene00016779
        WormFlux gene WBGene00016779
        NDB locus_tag CELE_C49D10.11
        NCBI gene 260202
        RefSeq protein NM_062279.2
        TrEMBL UniProtAcc Q95X89
        UniProt_GCRP UniProtAcc Q95X89
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 19 Aug 2005 17:08:06 WBPerson2970 Name_change: CGC_name: sdz-7
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sdz
    Allele (51)
    RNASeq_FPKM (74)
    Ortholog: WBGene00027784 Caenorhabditis briggsae From_analysis: OMA
      WBGene00029380 Caenorhabditis briggsae From_analysis: OMA
      WBGene00082669 Caenorhabditis remanei From_analysis: OMA
      WBGene00156360 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
      WBGene00086915 Caenorhabditis briggsae From_analysis: Inparanoid_8
      chrII_pilon.g4140 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in ABalpapaap; ABarappaap; NSM; and Y cell based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and alg-1 based on tiling array; RNA-seq; and microarray studies. Is affected by seventeen chemicals including tryptophan; multi-walled carbon nanotube; and Alovudine based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C49D10.11
    Corresponding_transcript: C49D10.11.1
    Associated_feature: WBsf649987
      WBsf649988
  Experimental_info: RNAi_result: WBRNAi00024868 Inferred_automatically: RNAi_primary
      WBRNAi00042798 Inferred_automatically: RNAi_primary
      WBRNAi00089012 Inferred_automatically: RNAi_primary
      WBRNAi00024867 Inferred_automatically: RNAi_primary
      WBRNAi00012138 Inferred_automatically: RNAi_primary
      WBRNAi00027233 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1015282
      Expr1146779
      Expr2015700
      Expr2033932
    Drives_construct: WBCnstr00027808
    Construct_product: WBCnstr00027808
    Microarray_results (13)
    Expression_cluster (81)
    Interaction: WBInteraction000295792
  Map_info: Map: II Position: -6.10319 Error: 0.015168
    Positive: Positive_clone: C49D10 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene