WormBase Tree Display for Gene: WBGene00016758
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| WBGene00016758 | SMap | S_parent | Sequence | C49A9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C49A9.4 | |||||||
| Molecular_name | C49A9.4 | ||||||||
| C49A9.4.1 | |||||||||
| CE37492 | |||||||||
| Other_name | CELE_C49A9.4 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | C49A9.4 | ||||||||
| DB_info | Database | AceView | gene | 4G985 | |||||
| 4G989 | |||||||||
| WormQTL | gene | WBGene00016758 | |||||||
| WormFlux | gene | WBGene00016758 | |||||||
| NDB | locus_tag | CELE_C49A9.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016758|UniProtKB=O44152 | |||||||
| family | PTHR21516 | ||||||||
| NCBI | gene | 3565549 | |||||||
| RefSeq | protein | NM_068534.5 | |||||||
| TREEFAM | TREEFAM_ID | TF318575 | |||||||
| TrEMBL | UniProtAcc | O44152 | |||||||
| UniProt_GCRP | UniProtAcc | O44152 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (98) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (18) | |||||||||
| Paralog (30) | |||||||||
| Structured_description | Concise_description | C49A9.4 is orthologous to the human gene CYSTATIN B (STEFIN B) (CSTB; OMIM:601145), which when mutated leads to disease. | Curator_confirmed | WBPerson1823 | |||||
| WBPerson567 | |||||||||
| Date_last_updated | 06 Aug 2004 00:00:00 | ||||||||
| Automated_description | Enriched in RIV; head mesodermal cell; intestine; and mechanosensory neurons based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including skn-1; hsf-1; and eat-2 based on microarray and RNA-seq studies. Is affected by fifteen chemicals including Alovudine; stavudine; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function (DUF272) and Protein of unknown function DUF272. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C49A9.4 | |||||||
| Corresponding_CDS_history | C49A9.4:wp131 | ||||||||
| Corresponding_transcript | C49A9.4.1 | ||||||||
| Associated_feature | WBsf646009 | ||||||||
| WBsf228380 | |||||||||
| WBsf228381 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00042766 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012653 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006580 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043612 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016328 | ||||||||
| Expr1146752 | |||||||||
| Expr2001757 | |||||||||
| Expr2019985 | |||||||||
| Drives_construct | WBCnstr00027826 | ||||||||
| Construct_product | WBCnstr00027826 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (100) | |||||||||
| Interaction (17) | |||||||||
| Map_info | Positive | Positive_clone | C49A9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 3.10559 | |||||||
| Method | Gene |
