WormBase Tree Display for Gene: WBGene00016710
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| WBGene00016710 | SMap | S_parent | Sequence | C46E10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxc-52 | Person_evidence | WBPerson655 | |||||
| Sequence_name | C46E10.4 | ||||||||
| Molecular_name | C46E10.4 | ||||||||
| C46E10.4.1 | |||||||||
| CE29724 | |||||||||
| Other_name | CELE_C46E10.4 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | fbxc-52 | ||||||||
| DB_info | Database | AceView | gene | 2E9 | |||||
| WormQTL | gene | WBGene00016710 | |||||||
| WormFlux | gene | WBGene00016710 | |||||||
| NDB | locus_tag | CELE_C46E10.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016710|UniProtKB=O61206 | |||||||
| family | PTHR31379 | ||||||||
| NCBI | gene | 173715 | |||||||
| RefSeq | protein | NM_062227.6 | |||||||
| TREEFAM | TREEFAM_ID | TF319442 | |||||||
| TrEMBL | UniProtAcc | O61206 | |||||||
| UniProt_GCRP | UniProtAcc | O61206 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 17 Jun 2008 14:44:53 | WBPerson2970 | Name_change | CGC_name | fbxc-52 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxc | ||||||||
| Allele (45) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (70) | |||||||||
| Paralog (31) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalpppapa; ABplpaaaaa; male distal tip cell; sensory neurons; and somatic gonad precursor based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and sir-2.1 based on microarray; tiling array; and RNA-seq studies. Is affected by nine chemicals including Cry5B; allantoin; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF3557; Domain of unknown function (DUF3557); and Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C46E10.4 | |||||||
| Corresponding_transcript | C46E10.4.1 | ||||||||
| Associated_feature | WBsf644079 | ||||||||
| WBsf987349 | |||||||||
| WBsf221039 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00042599 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00029861 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012030 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021851 | ||||||||
| Expr1037174 | |||||||||
| Expr1146582 | |||||||||
| Expr2011734 | |||||||||
| Expr2029973 | |||||||||
| Drives_construct | WBCnstr00027865 | ||||||||
| Construct_product | WBCnstr00027865 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (108) | |||||||||
| Interaction (16) | |||||||||
| Map_info | Map | II | Position | -6.21866 | Error | 0.000114 | |||
| Positive | Positive_clone | C46E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
