WormBase Tree Display for Gene: WBGene00016701
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| WBGene00016701 | SMap | S_parent | Sequence | C46A5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | dsb-3 | Person_evidence | WBPerson1547 | |||||
| Sequence_name | C46A5.5 | ||||||||
| Molecular_name | C46A5.5a | ||||||||
| C46A5.5a.1 | |||||||||
| CE08755 | |||||||||
| C46A5.5b | |||||||||
| CE44803 | |||||||||
| C46A5.5b.1 | |||||||||
| Other_name | CELE_C46A5.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | dsb-3 | ||||||||
| DB_info | Database | AceView | gene | 4I522 | |||||
| WormQTL | gene | WBGene00016701 | |||||||
| WormFlux | gene | WBGene00016701 | |||||||
| NDB | locus_tag | CELE_C46A5.5 | |||||||
| NCBI | gene | 183499 | |||||||
| RefSeq | protein | NM_001268378.1 | |||||||
| NM_001268377.3 | |||||||||
| TrEMBL | UniProtAcc | G4S5K3 | |||||||
| Q18649 | |||||||||
| UniProt_GCRP | UniProtAcc | Q18649 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 07 Jun 2018 14:30:09 | WBPerson1983 | Name_change | CGC_name | dsb-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dsb | ||||||||
| Allele (21) | |||||||||
| Strain | WBStrain00051189 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP4244 | ||||||||
| Ortholog (17) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABaraapapaa; ABaraapppaa; CAN; germ line; and serotonergic neurons based on RNA-seq; tiling array; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and hsf-1 based on tiling array; microarray; and RNA-seq studies. Is affected by ten chemicals including manganese chloride; Zidovudine; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C46A5.5a | |||||||
| C46A5.5b | |||||||||
| Corresponding_transcript | C46A5.5a.1 | ||||||||
| C46A5.5b.1 | |||||||||
| Associated_feature | WBsf668051 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00012016 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00029852 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00027229 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00024828 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00061550 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042581 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026414 | ||||||||
| Expr1146562 | |||||||||
| Expr2001672 | |||||||||
| Expr2019899 | |||||||||
| Drives_construct | WBCnstr00027874 | ||||||||
| Construct_product | WBCnstr00027874 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (94) | |||||||||
| Interaction (26) | |||||||||
| Map_info | Map | IV | Position | 3.46983 | |||||
| Positive | Positive_clone | C46A5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00061782 | ||||||||
| WBPaper00064207 | |||||||||
| WBPaper00064768 | |||||||||
| WBPaper00064969 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
