WormBase Tree Display for Gene: WBGene00016697
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| WBGene00016697 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cyp-33C2 | |||||||
| Sequence_name | C45H4.17 | ||||||||
| Molecular_name | C45H4.17a | ||||||||
| C45H4.17a.1 | |||||||||
| CE25818 | |||||||||
| C45H4.17b | |||||||||
| CE21319 | |||||||||
| C45H4.17b.1 | |||||||||
| Other_name | Y5H2B.f | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_C45H4.17 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | cyp-33C2 | ||||||||
| DB_info | Database | AceView | gene | 5C663 | |||||
| WormQTL | gene | WBGene00016697 | |||||||
| WormFlux | gene | WBGene00016697 | |||||||
| NDB | locus_tag | CELE_C45H4.17 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016697|UniProtKB=O44706 | |||||||
| family | PTHR24300 | ||||||||
| NCBI | gene | 178695 | |||||||
| RefSeq | protein | NM_071193.4 | |||||||
| NM_001316789.1 | |||||||||
| TrEMBL | UniProtAcc | O44706 | |||||||
| A0A0M7RF95 | |||||||||
| UniProt_GCRP | UniProtAcc | O44706 | |||||||
| OMIM | gene | 608713 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 21 Sep 2004 09:38:16 | WBPerson1971 | Name_change | CGC_name | cyp-33C2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cyp | ||||||||
| Allele (60) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Ortholog (131) | |||||||||
| Paralog (44) | |||||||||
| Structured_description | Automated_description | Predicted to enable heme binding activity; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen; and steroid hydroxylase activity. Predicted to be involved in organic acid metabolic process and xenobiotic metabolic process. Predicted to be located in cytoplasm and intracellular membrane-bounded organelle. Expressed in intestine. Human ortholog(s) of this gene implicated in several diseases, including Keshan disease; autoimmune disease (multiple); and hematologic cancer (multiple). Is an ortholog of several human genes including CYP2A7 (cytochrome P450 family 2 subfamily A member 7); CYP2B6 (cytochrome P450 family 2 subfamily B member 6); and CYP2C19 (cytochrome P450 family 2 subfamily C member 19). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model (39) | ||||||||
| Molecular_info | Corresponding_CDS | C45H4.17a | |||||||
| C45H4.17b | |||||||||
| Corresponding_transcript | C45H4.17a.1 | ||||||||
| C45H4.17b.1 | |||||||||
| Other_sequence | HGC10617_1 | ||||||||
| GRC02874_1 | |||||||||
| GR13653 | |||||||||
| Dviv_isotig33433 | |||||||||
| HSC00382_1 | |||||||||
| BXC00214_1 | |||||||||
| HG01755 | |||||||||
| Associated_feature | WBsf661157 | ||||||||
| WBsf999467 | |||||||||
| WBsf999468 | |||||||||
| WBsf1019265 | |||||||||
| WBsf1019266 | |||||||||
| WBsf231480 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00021192 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00007243 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012005 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042567 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00092656 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029849 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr8190 | ||||||||
| Expr1020590 | |||||||||
| Expr1146550 | |||||||||
| Expr2010713 | |||||||||
| Expr2028952 | |||||||||
| Drives_construct | WBCnstr00004996 | ||||||||
| WBCnstr00027877 | |||||||||
| Construct_product | WBCnstr00027877 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (124) | |||||||||
| Interaction (85) | |||||||||
| Map_info | Map | V | Position | -15.5743 | Error | 0.005379 | |||
| Positive | Positive_clone | C45H4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031529 | ||||||||
| WBPaper00031939 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062515 | |||||||||
| WBPaper00063655 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
