WormBase Tree Display for Gene: WBGene00016653

WBGene00016653 SMap: S_parent: Sequence: C44E4
  Identity: Version: 2
    Name: CGC_name: ssb-1 Laboratory_evidence: GNW
      Sequence_name: C44E4.4
      Molecular_name: C44E4.4
        C44E4.4.1
        CE08718
      Other_name: CELE_C44E4.4 Accession_evidence: NDB BX284601
      Public_name: ssb-1
    DB_info: Database: AceView gene 1F203
        WormQTL gene WBGene00016653
        WormFlux gene WBGene00016653
        NDB locus_tag CELE_C44E4.4
        Panther gene CAEEL|WormBase=WBGene00016653|UniProtKB=O01806
          family PTHR22792
        NCBI gene 172070
        RefSeq protein NM_059010.7
        TREEFAM TREEFAM_ID TF314476
        TrEMBL UniProtAcc O01806
        UniProt_GCRP UniProtAcc O01806
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 07 Dec 2017 13:24:47 WBPerson1983 Name_change: CGC_name: ssb-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ssb
    Allele (24)
    Strain: WBStrain00001616
    RNASeq_FPKM (74)
    GO_annotation (15)
    Ortholog (40)
    Paralog: WBGene00004147 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00020097 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable mRNA binding activity. Predicted to be involved in positive regulation of translation and tRNA processing. Predicted to be located in cytoplasmic stress granule; cytosol; and nucleus. Predicted to be part of ribonucleoprotein complex. Expressed in head and tail. Is an ortholog of human SSB (small RNA binding exonuclease protection factor La). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C44E4.4
    Corresponding_transcript: C44E4.4.1
    Other_sequence (56)
    Associated_feature: WBsf656238
      WBsf976670
      WBsf976671
      WBsf217552
      WBsf217553
      WBsf217554
  Experimental_info: RNAi_result: WBRNAi00024820 Inferred_automatically: RNAi_primary
      WBRNAi00007870 Inferred_automatically: RNAi_primary
      WBRNAi00070969 Inferred_automatically: RNAi_primary
      WBRNAi00003154 Inferred_automatically: RNAi_primary
      WBRNAi00024821 Inferred_automatically: RNAi_primary
      WBRNAi00042486 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram1744
      Expr5502
      Expr1021805
      Expr1037159
      Expr1146472
      Expr2001631
      Expr2019857
    Drives_construct: WBCnstr00002455
    Microarray_results (22)
    Expression_cluster (175)
    Interaction (292)
  Map_info: Map: I Position: -1.03681
    Positive: Positive_clone: C44E4 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027872
    WBPaper00029208
    WBPaper00038491
    WBPaper00055090
    WBPaper00060914
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene