WormBase Tree Display for Gene: WBGene00016616

WBGene00016616 SMap: S_parent: Sequence: C43H6
  Identity: Version: 2
    Name: CGC_name: mtpn-1 Person_evidence: WBPerson7529
      Sequence_name: C43H6.3
      Molecular_name: C43H6.3
        C43H6.3.1
        CE06954
      Other_name: CELE_C43H6.3 Accession_evidence: NDB BX284606
      Public_name: mtpn-1
    DB_info: Database: AceView gene XD27
        WormQTL gene WBGene00016616
        WormFlux gene WBGene00016616
        NDB locus_tag CELE_C43H6.3
        Panther gene CAEEL|WormBase=WBGene00016616|UniProtKB=Q18587
          family PTHR24189
        NCBI gene 180545
        RefSeq protein NM_001392734.1
        TREEFAM TREEFAM_ID TF327387
        TrEMBL UniProtAcc Q18587
        UniProt_GCRP UniProtAcc Q18587
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 21 Nov 2019 11:04:57 WBPerson1983 Name_change: CGC_name: mtpn-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mtpn
    Allele (38)
    RNASeq_FPKM (74)
    GO_annotation: 00061718
      00061719
      00061720
    Contained_in_operon: CEOPX028
    Ortholog (27)
    Structured_description: Automated_description: Predicted to be involved in regulation of barbed-end actin filament capping. Predicted to be located in cytoplasm and nucleus. Human ortholog(s) of this gene implicated in dilated cardiomyopathy. Is an ortholog of human MTPN (myotrophin). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:12930 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:15667)
  Molecular_info: Corresponding_CDS: C43H6.3
    Corresponding_transcript: C43H6.3.1
    Other_sequence: PVC02047_1
      CBC08036_1
      EL888678.1
    Associated_feature: WBsf662526
      WBsf235389
      WBsf235390
  Experimental_info: RNAi_result: WBRNAi00042401 Inferred_automatically: RNAi_primary
      WBRNAi00029773 Inferred_automatically: RNAi_primary
      WBRNAi00011896 Inferred_automatically: RNAi_primary
      WBRNAi00002045 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1016207
      Expr1037138
      Expr1146392
      Expr2001605
      Expr2019829
    Drives_construct: WBCnstr00027935
    Construct_product: WBCnstr00027935
    Microarray_results (21)
    Expression_cluster (94)
    SAGE_tag: SAGE:aaaattccacatttgga Strand: Antisense
      SAGE:cataagtata Strand: Sense
        Unambiguously_mapped
      SAGE:aaaattccac Strand: Antisense
      SAGE:tattaaagta Strand: Antisense
      SAGE:cataagtatattttatc Strand: Sense
        Unambiguously_mapped
      SAGE:ttcacttctttttctct Strand: Sense
        Unambiguously_mapped
      SAGE:tattaaagtaaaatatg Strand: Antisense
      SAGE:ttcacttctt Strand: Sense
        Unambiguously_mapped
    Interaction: WBInteraction000580967
  Map_info: Map: X Position: -15.5686
    Positive: Positive_clone: C43H6 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene