WormBase Tree Display for Gene: WBGene00016530
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| WBGene00016530 | SMap | S_parent | Sequence | C39D10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C39D10.2 | |||||||
| Molecular_name | C39D10.2 | ||||||||
| C39D10.2.1 | |||||||||
| CE47251 | |||||||||
| Other_name | C39D10.d | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_C39D10.2 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | C39D10.2 | ||||||||
| DB_info | Database | AceView | gene | XI509 | |||||
| WormQTL | gene | WBGene00016530 | |||||||
| WormFlux | gene | WBGene00016530 | |||||||
| NDB | locus_tag | CELE_C39D10.2 | |||||||
| NCBI | gene | 183336 | |||||||
| RefSeq | protein | NM_076929.6 | |||||||
| TrEMBL | UniProtAcc | Q18525 | |||||||
| UniProt_GCRP | UniProtAcc | Q18525 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (18) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (21) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalpppapa; ABplaapapa; ABplpaaaaa; neurons; and ventral nerve cord based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and hsf-1 based on tiling array; RNA-seq; and microarray studies. Is affected by ten chemicals including rotenone; D-glucose; and stavudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C39D10.2 | |||||||
| Corresponding_CDS_history | C39D10.2:wp230 | ||||||||
| Corresponding_transcript | C39D10.2.1 | ||||||||
| Associated_feature | WBsf1005987 | ||||||||
| WBsf1023330 | |||||||||
| WBsf235991 | |||||||||
| WBsf235992 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00042203 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011774 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016579 | ||||||||
| Expr1037085 | |||||||||
| Expr1146195 | |||||||||
| Expr2001532 | |||||||||
| Expr2019753 | |||||||||
| Drives_construct | WBCnstr00027996 | ||||||||
| Construct_product | WBCnstr00027996 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (127) | |||||||||
| Interaction (29) | |||||||||
| Map_info | Positive | Positive_clone | C39D10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -1.01458 | |||||||
| Reference | WBPaper00028564 | ||||||||
| Method | Gene |
