WormBase Tree Display for Gene: WBGene00016473
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| WBGene00016473 | SMap | S_parent | Sequence | C36C5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C36C5.4 | |||||||
| Molecular_name | C36C5.4a | ||||||||
| C36C5.4a.1 | |||||||||
| CE39567 | |||||||||
| C36C5.4b | |||||||||
| CE08593 | |||||||||
| C36C5.4b.1 | |||||||||
| Other_name | CELE_C36C5.4 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | C36C5.4 | ||||||||
| DB_info | Database | AceView | gene | 5D637 | |||||
| WormQTL | gene | WBGene00016473 | |||||||
| WormFlux | gene | WBGene00016473 | |||||||
| NDB | locus_tag | CELE_C36C5.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016473|UniProtKB=M1Z838 | |||||||
| family | PTHR21453 | ||||||||
| NCBI | gene | 183260 | |||||||
| RefSeq | protein | NM_001307797.1 | |||||||
| NM_071471.2 | |||||||||
| TrEMBL | UniProtAcc | O16409 | |||||||
| M1Z838 | |||||||||
| UniProt_GCRP | UniProtAcc | M1Z838 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (35) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (19) | |||||||||
| Paralog (90) | |||||||||
| Structured_description | Automated_description | Enriched in AIBL; AIBR; and muscle cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including sir-2.1; clk-1; and lin-15B based on microarray; tiling array; and RNA-seq studies. Is affected by resveratrol based on microarray studies. Is predicted to encode a protein with the following domains: Uncharacterised protein family UPF0376; Domain of unknown function DUF19; and Domain of unknown function (DUF19). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C36C5.4a | |||||||
| C36C5.4b | |||||||||
| Corresponding_CDS_history | C36C5.4:wp153 | ||||||||
| Corresponding_transcript | C36C5.4a.1 | ||||||||
| C36C5.4b.1 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00011693 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00042059 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023451 | ||||||||
| Expr1146057 | |||||||||
| Expr2001477 | |||||||||
| Expr2019698 | |||||||||
| Drives_construct | WBCnstr00028039 | ||||||||
| Construct_product | WBCnstr00028039 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (35) | |||||||||
| Interaction (12) | |||||||||
| Map_info | Positive | Positive_clone | C36C5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -12.7279 | |||||||
| Method | Gene |
