WormBase Tree Display for Gene: WBGene00016427
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| WBGene00016427 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | C34H4.5 | |||||||
| Molecular_name | C34H4.5a | ||||||||
| C34H4.5a.1 | |||||||||
| CE46564 | |||||||||
| C34H4.5b | |||||||||
| CE48761 | |||||||||
| C34H4.5b.1 | |||||||||
| Other_name | CELE_C34H4.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | C34H4.5 | ||||||||
| DB_info | Database | AceView | gene | 4C310 | |||||
| WormQTL | gene | WBGene00016427 | |||||||
| WormFlux | gene | WBGene00016427 | |||||||
| NDB | locus_tag | CELE_C34H4.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016427|UniProtKB=Q8MXH4 | |||||||
| family | PTHR46664 | ||||||||
| NCBI | gene | 176960 | |||||||
| RefSeq | protein | NM_001380047.1 | |||||||
| NM_001380048.1 | |||||||||
| TrEMBL | UniProtAcc | U4PB34 | |||||||
| Q8MXH4 | |||||||||
| UniProt_GCRP | UniProtAcc | Q8MXH4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 17 Oct 2011 15:07:28 | WBPerson1849 | Event | Acquires_merge | WBGene00044465 | ||||
| Acquires_merge | WBGene00044465 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (103) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00084587 | ||||||||
| 00084588 | |||||||||
| 00084589 | |||||||||
| 00084590 | |||||||||
| Contained_in_operon | CEOP4631 | ||||||||
| CEOP4615 | |||||||||
| Ortholog (23) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and transcription cis-regulatory region binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Is an ortholog of human ATMIN (ATM interactor). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C34H4.5a | |||||||
| C34H4.5b | |||||||||
| Corresponding_CDS_history | C34H4.5:wp202 | ||||||||
| C34H4.5:wp228 | |||||||||
| Corresponding_transcript | C34H4.5a.1 | ||||||||
| C34H4.5b.1 | |||||||||
| Other_sequence | CJC02516_1 | ||||||||
| CGC01104_1 | |||||||||
| CBC04672_1 | |||||||||
| Associated_feature (14) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00041940 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1015451 | ||||||||
| Expr1145947 | |||||||||
| Expr2001418 | |||||||||
| Expr2019641 | |||||||||
| Drives_construct | WBCnstr00023538 | ||||||||
| Construct_product | WBCnstr00023538 | ||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (86) | |||||||||
| Interaction | WBInteraction000544408 | ||||||||
| WBInteraction000544532 | |||||||||
| Map_info | Positive | Positive_clone | C34H4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | -18.2976 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
