WormBase Tree Display for Gene: WBGene00016376
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| WBGene00016376 | SMap | S_parent | Sequence | C33H5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | sec-10 | Person_evidence | WBPerson1683 | |||||
| WBPerson804 | |||||||||
| WBPerson297 | |||||||||
| Sequence_name | C33H5.9 | ||||||||
| Molecular_name | C33H5.9 | ||||||||
| C33H5.9.1 | |||||||||
| CE50274 | |||||||||
| Other_name | CELE_C33H5.9 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | sec-10 | ||||||||
| DB_info | Database | AceView | gene | 4I544 | |||||
| WormQTL | gene | WBGene00016376 | |||||||
| WormFlux | gene | WBGene00016376 | |||||||
| NDB | locus_tag | CELE_C33H5.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016376|UniProtKB=Q18406 | |||||||
| family | PTHR12100 | ||||||||
| NCBI | gene | 177562 | |||||||
| RefSeq | protein | NM_068882.8 | |||||||
| SwissProt | UniProtAcc | Q18406 | |||||||
| TREEFAM | TREEFAM_ID | TF314966 | |||||||
| UniProt_GCRP | UniProtAcc | Q18406 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 16 Oct 2006 17:00:28 | WBPerson2970 | Name_change | CGC_name | sec-10 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sec | ||||||||
| Allele (41) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00061075 | ||||||||
| 00061076 | |||||||||
| 00061077 | |||||||||
| 00061078 | |||||||||
| 00061079 | |||||||||
| 00061080 | |||||||||
| 00122010 | |||||||||
| Contained_in_operon | CEOP4252 | ||||||||
| CEOP4663 | |||||||||
| Ortholog (36) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in Golgi to plasma membrane transport and exocytosis. Predicted to be located in cytoplasm. Predicted to be part of exocyst. Expressed in several structures, including coelomocyte; excretory canal; head neurons; intestine; and reproductive system. Is an ortholog of human EXOC5 (exocyst complex component 5). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C33H5.9 | |||||||
| Corresponding_CDS_history | C33H5.9:wp245 | ||||||||
| Corresponding_transcript | C33H5.9.1 | ||||||||
| Other_sequence (43) | |||||||||
| Associated_feature | WBsf651949 | ||||||||
| WBsf230322 | |||||||||
| WBsf230323 | |||||||||
| WBsf230324 | |||||||||
| WBsf230325 | |||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern | Expr11914 | ||||||||
| Expr12016 | |||||||||
| Expr14501 | |||||||||
| Expr1026892 | |||||||||
| Expr1037011 | |||||||||
| Expr1145835 | |||||||||
| Expr2015707 | |||||||||
| Expr2033939 | |||||||||
| Drives_construct | WBCnstr00019553 | ||||||||
| WBCnstr00019798 | |||||||||
| WBCnstr00019799 | |||||||||
| WBCnstr00019996 | |||||||||
| WBCnstr00028120 | |||||||||
| Construct_product | WBCnstr00019553 | ||||||||
| WBCnstr00019798 | |||||||||
| WBCnstr00019799 | |||||||||
| WBCnstr00028120 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (77) | |||||||||
| Interaction (45) | |||||||||
| Map_info | Map | IV | Position | 3.47574 | Error | 0.000479 | |||
| Positive | Positive_clone | C33H5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00038584 | |||||||||
| WBPaper00045906 | |||||||||
| WBPaper00052149 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065078 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
