WormBase Tree Display for Gene: WBGene00016344

WBGene00016344 SMap: S_parent: Sequence: C33D12
  Identity: Version: 3
    Name: CGC_name: rsef-1 Person_evidence: WBPerson625
      Sequence_name: C33D12.6
      Molecular_name: C33D12.6
        C33D12.6.1
        CE53320
      Other_name: tag-312
        CELE_C33D12.6 Accession_evidence: NDB BX284606
      Public_name: rsef-1
    DB_info: Database: AceView gene XD674
        WormQTL gene WBGene00016344
        WormFlux gene WBGene00016344
        NDB locus_tag CELE_C33D12.6
        Panther gene CAEEL|WormBase=WBGene00016344|UniProtKB=Q22908
          family PTHR47977
        NCBI gene 180593
        RefSeq protein NM_001373254.3
        SwissProt UniProtAcc Q22908
        TREEFAM TREEFAM_ID TF313106
        UniProt_GCRP UniProtAcc Q22908
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 22 Apr 2005 11:55:18 WBPerson2970 Name_change: CGC_name: tag-312
        3 03 Mar 2014 14:12:13 WBPerson2970 Name_change: CGC_name: rsef-1
                Other_name: tag-312
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rsef
    Allele (129)
    Strain: WBStrain00036102
    RNASeq_FPKM (74)
    GO_annotation: 00076681
      00076682
      00076683
      00076684
      00076685
      00076686
      00121980
      00121981
      00121982
    Ortholog (36)
    Paralog (32)
    Structured_description: Automated_description: Predicted to enable GTP binding activity; GTPase activity; and calcium ion binding activity. Predicted to be involved in vesicle-mediated transport. Predicted to be located in perinuclear region of cytoplasm. Expressed in g1; spermathecal-uterine junction; and uterus. Is an ortholog of human RASEF (RAS and EF-hand domain containing). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C33D12.6
    Corresponding_CDS_history: C33D12.6:wp271
    Corresponding_transcript: C33D12.6.1
    Other_sequence (23)
    Associated_feature: WBsf670273
      WBsf670274
      WBsf1004510
      WBsf237130
      WBsf237131
  Experimental_info: RNAi_result: WBRNAi00107801 Inferred_automatically: RNAi_primary
      WBRNAi00041749 Inferred_automatically: RNAi_primary
      WBRNAi00011526 Inferred_automatically: RNAi_primary
      WBRNAi00029461 Inferred_automatically: RNAi_primary
      WBRNAi00107769 Inferred_automatically: RNAi_primary
      WBRNAi00011527 Inferred_automatically: RNAi_primary
      WBRNAi00107802 Inferred_automatically: RNAi_primary
      WBRNAi00041750 Inferred_automatically: RNAi_primary
      WBRNAi00107803 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr444
      Expr1026713
      Expr1145770
      Expr2015552
      Expr2033787
    Drives_construct: WBCnstr00019121
      WBCnstr00037836
    Construct_product: WBCnstr00037836
    Microarray_results (24)
    Expression_cluster (95)
    Interaction (14)
  Map_info: Map: X Position: -12.5292 Error: 0.051852
    Positive: Positive_clone: C33D12 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5109
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00043419
    WBPaper00045833
    WBPaper00052220
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene