WormBase Tree Display for Gene: WBGene00016193
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| WBGene00016193 | SMap | S_parent | Sequence | C28H8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C28H8.2 | |||||||
| Molecular_name | C28H8.2 | ||||||||
| C28H8.2.1 | |||||||||
| CE32812 | |||||||||
| C28H8.2.2 | |||||||||
| Other_name | CELE_C28H8.2 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | C28H8.2 | ||||||||
| DB_info | Database | AceView | gene | 3H15 | |||||
| WormQTL | gene | WBGene00016193 | |||||||
| WormFlux | gene | WBGene00016193 | |||||||
| NDB | locus_tag | CELE_C28H8.2 | |||||||
| NCBI | gene | 182995 | |||||||
| RefSeq | protein | NM_001395335.1 | |||||||
| SwissProt | UniProtAcc | Q09243 | |||||||
| TREEFAM | TREEFAM_ID | TF322161 | |||||||
| UniProt_GCRP | UniProtAcc | Q09243 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (49) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (21) | |||||||||
| Paralog | WBGene00017694 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Structured_description | Automated_description | Enriched in AFD; PLM; and intestine based on RNA-seq and microarray studies. Is affected by several genes including daf-2; rrf-3; and elt-2 based on microarray and RNA-seq studies. Is affected by eight chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Family of unknown function (DUF5390) and Protein of unknown function DUF5390. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C28H8.2 | |||||||
| Corresponding_CDS_history | C28H8.2:wp91 | ||||||||
| Corresponding_transcript | C28H8.2.1 | ||||||||
| C28H8.2.2 | |||||||||
| Associated_feature | WBsf225026 | ||||||||
| WBsf225027 | |||||||||
| WBsf225028 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00099015 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00005724 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041428 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011311 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029302 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018805 | ||||||||
| Expr1145458 | |||||||||
| Expr2001204 | |||||||||
| Expr2019426 | |||||||||
| Drives_construct | WBCnstr00028255 | ||||||||
| Construct_product | WBCnstr00028255 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (66) | |||||||||
| Interaction | WBInteraction000253864 | ||||||||
| Map_info | Positive | Positive_clone | C28H8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -1.43461 | |||||||
| Method | Gene |
