WormBase Tree Display for Gene: WBGene00016173
expand all nodes | collapse all nodes | view schema
WBGene00016173 | SMap | S_parent | Sequence | C27H5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | fust-1 | Person_evidence | WBPerson1352 | |||||
Sequence_name | C27H5.3 | ||||||||
Molecular_name | C27H5.3a | ||||||||
C27H5.3a.1 | |||||||||
CE27099 | |||||||||
C27H5.3b | |||||||||
CE51847 | |||||||||
C27H5.3b.1 | |||||||||
C27H5.3b.2 | |||||||||
Other_name | CELE_C27H5.3 | Accession_evidence | NDB | BX284602 | |||||
Public_name | fust-1 | ||||||||
DB_info | Database | AceView | gene | 2H445 | |||||
WormQTL | gene | WBGene00016173 | |||||||
WormFlux | gene | WBGene00016173 | |||||||
NDB | locus_tag | CELE_C27H5.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00016173|UniProtKB=Q18265 | |||||||
family | PTHR23238 | ||||||||
NCBI | gene | 174175 | |||||||
RefSeq | protein | NM_063082.7 | |||||||
NM_001381492.1 | |||||||||
TrEMBL | UniProtAcc | Q18265 | |||||||
A0A1N7SYQ6 | |||||||||
UniProt_GCRP | UniProtAcc | Q18265 | |||||||
OMIM | gene | 133450 | |||||||
137070 | |||||||||
601574 | |||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 03 Aug 2010 10:05:58 | WBPerson2970 | Name_change | CGC_name | fust-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | fust | ||||||||
Allele (42) | |||||||||
Strain | WBStrain00001567 | ||||||||
WBStrain00047288 | |||||||||
WBStrain00047287 | |||||||||
WBStrain00047289 | |||||||||
WBStrain00050865 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (11) | |||||||||
Ortholog (47) | |||||||||
Structured_description | Automated_description | Predicted to enable RNA binding activity and transcription coregulator activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Expressed in gonad; head; intestinal cell; neurons; and tail. Human ortholog(s) of this gene implicated in amyotrophic lateral sclerosis type 6; connective tissue cancer (multiple); and essential tremor 4. Is an ortholog of human FUS (FUS RNA binding protein). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:1289 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4010) | ||||
DOID:0111431 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4010) | ||||||
DOID:0060198 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4010) | ||||||
DOID:4549 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11547) | ||||||
DOID:1115 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4010) | ||||||
DOID:332 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4010) | ||||||
DOID:3382 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4010) | ||||||
DOID:3371 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11547) | ||||||
DOID:3369 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3508) | ||||||
Molecular_info | Corresponding_CDS (2) | ||||||||
Corresponding_transcript | C27H5.3a.1 | ||||||||
C27H5.3b.1 | |||||||||
C27H5.3b.2 | |||||||||
Other_sequence (37) | |||||||||
Associated_feature | WBsf644354 | ||||||||
WBsf988367 | |||||||||
WBsf221563 | |||||||||
Experimental_info (8) | |||||||||
Map_info | Map | II | Position | 0.496031 | Error | 0.000218 | |||
Positive | Positive_clone | C27H5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (15) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |