WormBase Tree Display for Gene: WBGene00016160

WBGene00016160 SMap: S_parent: Sequence: C27D6
  Identity: Version: 2
    Name: Sequence_name: C27D6.1
      Molecular_name: C27D6.1
        C27D6.1.1
        CE52759
      Other_name: CELE_C27D6.1 Accession_evidence: NDB BX284602
      Public_name: C27D6.1
    DB_info: Database: AceView gene 2F467
        WormQTL gene WBGene00016160
        WormFlux gene WBGene00016160
        NDB locus_tag CELE_C27D6.1
        Panther gene CAEEL|WormBase=WBGene00016160|UniProtKB=Q10030
          family PTHR18863
        NCBI gene 182964
        RefSeq protein NM_001365319.2
        SwissProt UniProtAcc Q10030
        UniProt_GCRP UniProtAcc Q10030
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 18 Jul 2018 16:19:21 WBPerson1983 Event: Split_into: WBGene00303362
      Split_into: WBGene00303362
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (78)
    RNASeq_FPKM (74)
    Ortholog (27)
    Structured_description: Automated_description: Enriched in head neurons; hypodermis; rectal epithelial cell; and rectum based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-12; eat-2; and sir-2.1 based on tiling array; microarray; RNA-seq; and proteomic studies. Is affected by Progesterone; Acrylamide; and Colistin based on microarray studies. Human CCDC170 enables microtubule binding activity. Is predicted to encode a protein with the following domain: Coiled-coil domain-containing protein 170-like. Is an ortholog of human CCDC170 (coiled-coil domain containing 170). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C27D6.1
    Corresponding_CDS_history: C27D6.1:wp266
    Corresponding_transcript: C27D6.1.1
    Associated_feature: WBsf657568
      WBsf987808
      WBsf987809
      WBsf1012190
      WBsf221240
  Experimental_info: RNAi_result: WBRNAi00008448 Inferred_automatically: RNAi_primary
      WBRNAi00041342 Inferred_automatically: RNAi_primary
      WBRNAi00011254 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1013323
      Expr1145381
      Expr2001170
      Expr2019392
    Drives_construct: WBCnstr00014308
      WBCnstr00014309
      WBCnstr00014311
      WBCnstr00014312
      WBCnstr00028285
    Construct_product: WBCnstr00028285
    Microarray_results (20)
    Expression_cluster (44)
    SAGE_tag: SAGE:aagaaattgg Strand: Sense
        Unambiguously_mapped
      SAGE:ttgaattgacttagact Strand: Antisense
      SAGE:atgtcactctactaaac Strand: Sense
        Unambiguously_mapped
      SAGE:ttgaattgac Strand: Antisense
      SAGE:aaaaaagttc Strand: Sense
        Unambiguously_mapped
      SAGE:tttccaccttgatggat Strand: Sense
        Unambiguously_mapped
      SAGE:atcttcttcg Strand: Antisense
      SAGE:aaaaaagttccaccgat Strand: Sense
        Unambiguously_mapped
      SAGE:aaaatcgtat Strand: Sense
        Unambiguously_mapped
    Interaction: WBInteraction000214647
      WBInteraction000325545
      WBInteraction000362261
      WBInteraction000575326
  Map_info: Positive: Positive_clone: C27D6 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II -1.95272
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene