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WormBase Tree Display for Gene: WBGene00016153

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Name Class

WBGene00016153SMapS_parentSequenceC27A2
IdentityVersion2
NameCGC_nameidpb-2Person_evidenceWBPerson1820
Sequence_nameC27A2.5
Molecular_nameC27A2.5
C27A2.5.1
CE04105
Other_nameCELE_C27A2.5Accession_evidenceNDBBX284602
Public_nameidpb-2
DB_infoDatabaseAceViewgene2F356
WormQTLgeneWBGene00016153
WormFluxgeneWBGene00016153
NDBlocus_tagCELE_C27A2.5
PanthergeneCAEEL|WormBase=WBGene00016153|UniProtKB=Q18238
familyPTHR31369
NCBIgene182949
RefSeqproteinNM_062535.4
TREEFAMTREEFAM_IDTF315734
TrEMBLUniProtAccQ18238
UniProt_GCRPUniProtAccQ18238
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:57WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
204 Jan 2022 10:41:14WBPerson1983Name_changeCGC_nameidpb-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classidpb
Allele (21)
RNASeq_FPKM (74)
Ortholog (25)
ParalogWBGene00007356Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009251Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011266Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011313Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00015457Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00015458Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044235Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in FLPL; FLPR; URXL; URXR; and pharynx based on microarray and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by nine chemicals including D-glucose; Zidovudine; and cholesterol based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC27A2.5
Corresponding_transcriptC27A2.5.1
Associated_featureWBsf650037
WBsf222995
Experimental_infoRNAi_resultWBRNAi00029251Inferred_automaticallyRNAi_primary
WBRNAi00041306Inferred_automaticallyRNAi_primary
WBRNAi00010159Inferred_automaticallyRNAi_primary
WBRNAi00011233Inferred_automaticallyRNAi_primary
Expr_patternExpr1145346
Expr2001150
Expr2019371
Drives_constructWBCnstr00028286
Construct_productWBCnstr00028286
Microarray_results (16)
Expression_cluster (113)
Interaction (29)
Map_infoPositivePositive_cloneC27A2Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII-2.54888
ReferenceWBPaper00038491
WBPaper00064648
MethodGene