WormBase Tree Display for Gene: WBGene00016153
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WBGene00016153 | SMap | S_parent | Sequence | C27A2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | idpb-2 | Person_evidence | WBPerson1820 | |||||
Sequence_name | C27A2.5 | ||||||||
Molecular_name | C27A2.5 | ||||||||
C27A2.5.1 | |||||||||
CE04105 | |||||||||
Other_name | CELE_C27A2.5 | Accession_evidence | NDB | BX284602 | |||||
Public_name | idpb-2 | ||||||||
DB_info | Database | AceView | gene | 2F356 | |||||
WormQTL | gene | WBGene00016153 | |||||||
WormFlux | gene | WBGene00016153 | |||||||
NDB | locus_tag | CELE_C27A2.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00016153|UniProtKB=Q18238 | |||||||
family | PTHR31369 | ||||||||
NCBI | gene | 182949 | |||||||
RefSeq | protein | NM_062535.4 | |||||||
TREEFAM | TREEFAM_ID | TF315734 | |||||||
TrEMBL | UniProtAcc | Q18238 | |||||||
UniProt_GCRP | UniProtAcc | Q18238 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 04 Jan 2022 10:41:14 | WBPerson1983 | Name_change | CGC_name | idpb-2 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | idpb | ||||||||
Allele (21) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (25) | |||||||||
Paralog | WBGene00007356 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00009251 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00011266 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00011313 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00015457 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00015458 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00044235 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Enriched in FLPL; FLPR; URXL; URXR; and pharynx based on microarray and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by nine chemicals including D-glucose; Zidovudine; and cholesterol based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C27A2.5 | |||||||
Corresponding_transcript | C27A2.5.1 | ||||||||
Associated_feature | WBsf650037 | ||||||||
WBsf222995 | |||||||||
Experimental_info | RNAi_result | WBRNAi00029251 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00041306 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00010159 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00011233 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1145346 | ||||||||
Expr2001150 | |||||||||
Expr2019371 | |||||||||
Drives_construct | WBCnstr00028286 | ||||||||
Construct_product | WBCnstr00028286 | ||||||||
Microarray_results (16) | |||||||||
Expression_cluster (113) | |||||||||
Interaction (29) | |||||||||
Map_info | Positive | Positive_clone | C27A2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | -2.54888 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00064648 | |||||||||
Method | Gene |