WormBase Tree Display for Gene: WBGene00016149
expand all nodes | collapse all nodes | view schema
WBGene00016149 | SMap | S_parent | Sequence | C26F1 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | frpr-3 | Person_evidence | WBPerson260 | |||
Sequence_name | C26F1.6 | ||||||
Molecular_name | C26F1.6 | ||||||
C26F1.6.1 | |||||||
CE06880 | |||||||
Other_name | CELE_C26F1.6 | Accession_evidence | NDB | BX284605 | |||
Public_name | frpr-3 | ||||||
DB_info | Database | AceView | gene | 5I249 | |||
WormQTL | gene | WBGene00016149 | |||||
WormFlux | gene | WBGene00016149 | |||||
NDB | locus_tag | CELE_C26F1.6 | |||||
Panther | gene | CAEEL|WormBase=WBGene00016149|UniProtKB=G5EG36 | |||||
family | PTHR47323 | ||||||
NCBI | gene | 182942 | |||||
RefSeq | protein | NM_072603.5 | |||||
TREEFAM | TREEFAM_ID | TF316702 | |||||
TrEMBL | UniProtAcc | G5EG36 | |||||
UniProt_GCRP | UniProtAcc | G5EG36 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | frpr | ||||||
Allele (30) | |||||||
Strain | WBStrain00037411 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00019435 | ||||||
00019436 | |||||||
00019437 | |||||||
00019438 | |||||||
00121836 | |||||||
00121837 | |||||||
00121838 | |||||||
Ortholog (32) | |||||||
Paralog (187) | |||||||
Structured_description | Concise_description | C26F1.6 encodes a homolog of the functionally active Fmrf Receptor (FR; CG2114) of D. melanogaster; it is thus possible that C26F1.6 is a receptor for one of the FMRF-like neurotransmitters in C. elegans (e.g., FLP-1 through FLP-12). | Paper_evidence | WBPaper00013175 | |||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Expressed in head neurons and nerve ring. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C26F1.6 | |||||
Corresponding_transcript | C26F1.6.1 | ||||||
Other_sequence | FC543087.1 | ||||||
JI180540.1 | |||||||
ACC02412_1 | |||||||
Acan_isotig09697 | |||||||
FC545929.1 | |||||||
FC543205.1 | |||||||
Associated_feature | WBsf1000510 | ||||||
WBsf1000511 | |||||||
WBsf1019949 | |||||||
Experimental_info | RNAi_result (4) | ||||||
Expr_pattern | Expr12803 | ||||||
Expr14688 | |||||||
Expr1021481 | |||||||
Expr1145325 | |||||||
Expr2011904 | |||||||
Expr2030141 | |||||||
Drives_construct | WBCnstr00022670 | ||||||
WBCnstr00022783 | |||||||
WBCnstr00028290 | |||||||
WBCnstr00041289 | |||||||
Construct_product | WBCnstr00022670 | ||||||
WBCnstr00028290 | |||||||
WBCnstr00041289 | |||||||
Microarray_results (20) | |||||||
Expression_cluster (78) | |||||||
Interaction (25) | |||||||
Map_info | Map | V | Position | 0.883111 | |||
Positive | Positive_clone | C26F1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00006132 | ||||||
WBPaper00024457 | |||||||
WBPaper00025186 | |||||||
WBPaper00047697 | |||||||
WBPaper00051667 | |||||||
WBPaper00055102 | |||||||
WBPaper00065946 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |