WormBase Tree Display for Gene: WBGene00016143
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| WBGene00016143 | SMap | S_parent | Sequence | C26E6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | eri-9 | Paper_evidence | WBPaper00035199 | |||||
| Person_evidence | WBPerson545 | ||||||||
| Sequence_name | C26E6.7 | ||||||||
| Molecular_name (17) | |||||||||
| Other_name | CELE_C26E6.7 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | eri-9 | ||||||||
| DB_info | Database | AceView | gene | 3G23 | |||||
| WormQTL | gene | WBGene00016143 | |||||||
| WormFlux | gene | WBGene00016143 | |||||||
| NDB | locus_tag | CELE_C26E6.7 | |||||||
| NCBI | gene | 175665 | |||||||
| RefSeq | protein | NM_001392083.1 | |||||||
| NM_001306697.3 | |||||||||
| NM_001306698.3 | |||||||||
| NM_065642.6 | |||||||||
| TREEFAM | TREEFAM_ID | TF316225 | |||||||
| TrEMBL | UniProtAcc | H2KZ13 | |||||||
| A0A078BTJ4 | |||||||||
| A0A078BS27 | |||||||||
| Q95QU3 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A078BTJ4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 24 Nov 2009 09:48:23 | WBPerson9133 | Name_change | CGC_name | eri-9 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | eri | ||||||||
| Allele (37) | |||||||||
| Strain | WBStrain00040763 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP3244 | ||||||||
| Ortholog (21) | |||||||||
| Paralog | WBGene00011959 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00013596 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Automated_description | Enriched in germ line; germline precursor cell; intestine; and neurons based on microarray; tiling array; and RNA-seq studies. Is affected by several genes including hsf-1; gld-1; and sir-2.1 based on proteomic; microarray; and RNA-seq studies. Is affected by ten chemicals including D-glucose; Alovudine; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Zc3h12a-like Ribonuclease NYN domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C26E6.7a | |||||||
| C26E6.7b | |||||||||
| C26E6.7c | |||||||||
| C26E6.7d | |||||||||
| Corresponding_CDS_history | C26E6.7:wp44 | ||||||||
| C26E6.7a:wp88 | |||||||||
| C26E6.7b:wp88 | |||||||||
| Corresponding_transcript | C26E6.7a.1 | ||||||||
| C26E6.7a.2 | |||||||||
| C26E6.7a.3 | |||||||||
| C26E6.7a.4 | |||||||||
| C26E6.7b.1 | |||||||||
| C26E6.7b.2 | |||||||||
| C26E6.7b.3 | |||||||||
| C26E6.7c.1 | |||||||||
| C26E6.7d.1 | |||||||||
| Associated_feature | WBsf645134 | ||||||||
| WBsf645135 | |||||||||
| WBsf645136 | |||||||||
| WBsf654957 | |||||||||
| WBsf992248 | |||||||||
| WBsf224827 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00011216 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00005647 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029233 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007942 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041275 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012765 | ||||||||
| Expr1036904 | |||||||||
| Expr1145316 | |||||||||
| Expr2011366 | |||||||||
| Expr2029602 | |||||||||
| Drives_construct | WBCnstr00028296 | ||||||||
| Construct_product | WBCnstr00006348 | ||||||||
| WBCnstr00028296 | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (123) | |||||||||
| Interaction (24) | |||||||||
| Map_info | Map | III | Position | -2.34518 | Error | 0.00283 | |||
| Positive | Positive_clone | C26E6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00035199 | ||||||||
| WBPaper00038150 | |||||||||
| WBPaper00040558 | |||||||||
| WBPaper00043989 | |||||||||
| WBPaper00046393 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
