WormBase Tree Display for Gene: WBGene00015909
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WBGene00015909 | SMap | S_parent | Sequence | C17F4 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | clec-124 | Person_evidence | WBPerson2531 | |||
Sequence_name | C17F4.1 | ||||||
Molecular_name | C17F4.1 | ||||||
C17F4.1.1 | |||||||
CE52403 | |||||||
Other_name | CELE_C17F4.1 | Accession_evidence | NDB | BX284602 | |||
Public_name | clec-124 | ||||||
DB_info | Database | AceView | gene | 2D541 | |||
WormQTL | gene | WBGene00015909 | |||||
WormFlux | gene | WBGene00015909 | |||||
NDB | locus_tag | CELE_C17F4.1 | |||||
Panther | gene | CAEEL|WormBase=WBGene00015909|UniProtKB=O16543 | |||||
family | PTHR23124 | ||||||
NCBI | gene | 182737 | |||||
RefSeq | protein | NM_001356828.2 | |||||
TrEMBL | UniProtAcc | O16543 | |||||
UniProt_GCRP | UniProtAcc | O16543 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | clec | ||||||
Allele (100) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog | WBGene00135791 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | |||
WBGene00119635 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||
CSP39.g21785 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||
chrII_pilon.g3919 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00119598 | Caenorhabditis japonica | From_analysis | WormBase-Compara | ||||
Structured_description | Automated_description | Enriched in intestine and in male based on RNA-seq and microarray studies. Is affected by several genes including daf-2; lin-4; and lin-14 based on microarray and RNA-seq studies. Is affected by six chemicals including aldicarb; Zidovudine; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C17F4.1 | |||||
Corresponding_CDS_history | C17F4.1:wp261 | ||||||
Corresponding_transcript | C17F4.1.1 | ||||||
Experimental_info | RNAi_result (4) | ||||||
Expr_pattern | Expr1014959 | ||||||
Expr1036800 | |||||||
Expr1144860 | |||||||
Microarray_results (15) | |||||||
Expression_cluster (32) | |||||||
Map_info | Map | II | Position | -7.19839 | Error | 0.045024 | |
Positive | Positive_clone | C17F4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |