WormBase Tree Display for Gene: WBGene00015897

WBGene00015897 SMap: S_parent: Sequence: CHROMOSOME_V
  Identity: Version: 3
    Name: CGC_name: nhr-156 Person_evidence: WBPerson600
      Sequence_name: C17E7.1
      Molecular_name: C17E7.1
        C17E7.1.1
        CE51283
      Other_name: nhr-284 Person_evidence: WBPerson600
            WBPerson655
        T20C7.a Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        CELE_C17E7.1 Accession_evidence: NDB BX284605
      Public_name: nhr-156
    DB_info: Database: AceView gene 5E381
        WormQTL gene WBGene00015897
        WormFlux gene WBGene00015897
        NDB locus_tag CELE_C17E7.1
        Panther gene CAEEL|WormBase=WBGene00015897|UniProtKB=O16398
          family PTHR45680
        NCBI gene 182727
        RefSeq protein NM_001322545.3
        TREEFAM TREEFAM_ID TF315604
        TrEMBL UniProtAcc O16398
        UniProt_GCRP UniProtAcc O16398
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 22 Jul 2005 10:29:11 WBPerson2970 Name_change: CGC_name: nhr-156
        3 28 Jan 2016 15:57:53 WBPerson2970 Event: Acquires_merge: WBGene00020606
              Name_change: Other_name: nhr-284
      Acquires_merge: WBGene00020606
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    Allele (142)
    RNASeq_FPKM (74)
    GO_annotation: 00028000
      00028001
      00028002
      00121621
      00121622
      00121623
      00121624
    Ortholog (25)
    Paralog (218)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Expressed in excretory system; intestine; neurons; pharynx; and ventral nerve cord. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C17E7.1
    Corresponding_CDS_history: C17E7.1:wp252
    Corresponding_transcript: C17E7.1.1
    Other_sequence: CJC10864_1
    Associated_feature: WBsf661199
      WBsf999711
      WBsf1019441
    Transcription_factor: WBTranscriptionFactor000960
  Experimental_info: RNAi_result: WBRNAi00035698 Inferred_automatically: RNAi_primary
      WBRNAi00018897 Inferred_automatically: RNAi_primary
      WBRNAi00010908 Inferred_automatically: RNAi_primary
      WBRNAi00040803 Inferred_automatically: RNAi_primary
      WBRNAi00029007 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr7437
      Expr1016132
      Expr1025506
      Expr1144845
      Expr1157167
      Expr2014056
      Expr2032296
    Drives_construct: WBCnstr00012580
      WBCnstr00037838
    Construct_product: WBCnstr00037838
    Microarray_results (33)
    Expression_cluster (141)
    Interaction: WBInteraction000135934
      WBInteraction000142486
      WBInteraction000322855
      WBInteraction000433043
      WBInteraction000575890
  Map_info: Map: V Position: -7.5543 Error: 0.004401
    Positive: Positive_clone: C17E7 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5339
        5400
        5043
    Pseudo_map_position
  Reference: WBPaper00062305
    WBPaper00063197
    WBPaper00063655
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene