WormBase Tree Display for Gene: WBGene00015838
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| WBGene00015838 | SMap | S_parent | Sequence | C16C4 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | math-9 | Person_evidence | WBPerson655 | ||||||
| Sequence_name | C16C4.14 | |||||||||
| Molecular_name | C16C4.14 | |||||||||
| C16C4.14.1 | ||||||||||
| CE08210 | ||||||||||
| Other_name | CELE_C16C4.14 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | math-9 | |||||||||
| DB_info | Database (11) | |||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 12 Dec 2005 17:51:12 | WBPerson1849 | Event | Changed_class | CDS | Pseudogene | ||||
| 3 | 12 Dec 2005 17:54:47 | WBPerson2970 | Name_change | CGC_name | math-9 | |||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0001217 | ||||||||
| Gene_class | math | |||||||||
| Allele (72) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog (18) | ||||||||||
| Paralog (85) | ||||||||||
| Structured_description | Automated_description | Is affected by several genes including daf-2; eat-2; and sir-2.1 based on microarray; tiling array; and RNA-seq studies. Is affected by resveratrol based on microarray studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; and TRAF-like. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS | C16C4.14 | ||||||||
| Corresponding_transcript | C16C4.14.1 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00040700 | Inferred_automatically | RNAi_primary | ||||||
| WBRNAi00011814 | Inferred_automatically | RNAi_primary | ||||||||
| WBRNAi00010838 | Inferred_automatically | RNAi_primary | ||||||||
| Expr_pattern | Expr1027549 | |||||||||
| Expr1144741 | ||||||||||
| Expr2013424 | ||||||||||
| Expr2031658 | ||||||||||
| Drives_construct | WBCnstr00028527 | |||||||||
| Construct_product | WBCnstr00028527 | |||||||||
| Microarray_results (15) | ||||||||||
| Expression_cluster (46) | ||||||||||
| Interaction (12) | ||||||||||
| Map_info | Map | II | Position | -14.2256 | Error | 0.001994 | ||||
| Positive | Positive_clone | C16C4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
