WormBase Tree Display for Gene: WBGene00015828
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| WBGene00015828 | SMap | S_parent | Sequence | C16C4 | |||
|---|---|---|---|---|---|---|---|
| Identity (6) | |||||||
| Gene_info | Biotype | SO:0001217 | |||||
| Gene_class | math | ||||||
| Allele (84) | |||||||
| RNASeq_FPKM (74) | |||||||
| Ortholog (18) | |||||||
| Paralog (85) | |||||||
| Structured_description | Automated_description | Enriched in intestine based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twelve chemicals including Heme; methylmercuric chloride; and rotenone based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; and TRAF-like. | Paper_evidence | WBPaper00065943 | |||
| Curator_confirmed | WBPerson324 | ||||||
| WBPerson37462 | |||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
| Molecular_info | Corresponding_CDS | C16C4.4a | |||||
| C16C4.4b | |||||||
| Corresponding_CDS_history (2) | |||||||
| Corresponding_transcript | C16C4.4a.1 | ||||||
| C16C4.4b.1 | |||||||
| Associated_feature | WBsf220890 | ||||||
| Experimental_info | RNAi_result | WBRNAi00010842 | Inferred_automatically | RNAi_primary | |||
| WBRNAi00103193 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00040705 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00028959 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1144747 | ||||||
| Expr2031626 | |||||||
| Drives_construct | WBCnstr00028536 | ||||||
| Construct_product | WBCnstr00028536 | ||||||
| Microarray_results (16) | |||||||
| Expression_cluster (214) | |||||||
| Interaction (14) | |||||||
| Map_info | Map | II | Position | -14.2723 | Error | 0.002649 | |
| Positive | Positive_clone | C16C4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Pseudo_map_position | |||||||
| Reference | WBPaper00062345 | ||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
| Method | Gene |
