WormBase Tree Display for Gene: WBGene00015783
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| WBGene00015783 | SMap | S_parent | Sequence | C15B12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C15B12.1 | |||||||
| Molecular_name | C15B12.1 | ||||||||
| C15B12.1.1 | |||||||||
| CE29665 | |||||||||
| Other_name | SOX | Paper_evidence | WBPaper00046400 | ||||||
| CELE_C15B12.1 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | C15B12.1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (30) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00015788 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable L-pipecolate oxidase activity and sarcosine oxidase activity. Predicted to be involved in L-lysine catabolic process to acetyl-CoA via L-pipecolate. Predicted to be located in peroxisome. Is an ortholog of human PIPOX (pipecolic acid and sarcosine oxidase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C15B12.1 | |||||||
| Corresponding_transcript | C15B12.1.1 | ||||||||
| Other_sequence | PPC14071_1 | ||||||||
| CJC06699_1 | |||||||||
| Oden_isotig27053 | |||||||||
| Name_isotig01740 | |||||||||
| Associated_feature | WBsf648234 | ||||||||
| WBsf235840 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00040582 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00010775 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012663 | ||||||||
| Expr1036753 | |||||||||
| Expr1144636 | |||||||||
| Expr2000802 | |||||||||
| Expr2019020 | |||||||||
| Drives_construct | WBCnstr00028571 | ||||||||
| Construct_product | WBCnstr00028571 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (125) | |||||||||
| Interaction | WBInteraction000175880 | ||||||||
| WBInteraction000190072 | |||||||||
| WBInteraction000221394 | |||||||||
| WBInteraction000262712 | |||||||||
| WBInteraction000346931 | |||||||||
| WBInteraction000364979 | |||||||||
| WBInteraction000414058 | |||||||||
| WBInteraction000458428 | |||||||||
| Map_info | Positive | Positive_clone | C15B12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -2.89394 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00046400 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065331 | |||||||||
| Method | Gene |
