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WormBase Tree Display for Gene: WBGene00015705

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Name Class

WBGene00015705SMapS_parentSequenceC12D5
IdentityVersion2
NameCGC_namenhr-152Person_evidenceWBPerson600
Sequence_nameC12D5.2
Molecular_nameC12D5.2a
C12D5.2a.1
CE35230
C12D5.2b
C12D5.2c
Other_nameCELE_C12D5.2Accession_evidenceNDBBX284605
Public_namenhr-152
DB_infoDatabaseAceViewgene5I169
WormQTLgeneWBGene00015705
WormFluxgeneWBGene00015705
NDBlocus_tagCELE_C12D5.2
PanthergeneCAEEL|WormBase=WBGene00015705|UniProtKB=Q17929
familyPTHR24083
NCBIgene182533
RefSeqproteinNR_136359.1
NR_136358.1
NM_072589.5
TrEMBLUniProtAccQ17929
UniProt_GCRPUniProtAccQ17929
RNAcentralURSidURS0000A1A990
URS0000A41A71
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:56WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
222 Jul 2005 10:29:11WBPerson2970Name_changeCGC_namenhr-152
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
Allele (31)
RNASeq_FPKM (74)
GO_annotation (13)
Ortholog (41)
Paralog (42)
Structured_descriptionAutomated_descriptionPredicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and nuclear receptor activity. Predicted to be involved in cell differentiation and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Expressed in head neurons; intestine; and pharynx.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC12D5.2a
Corresponding_CDS_historyC12D5.2:wp106
Corresponding_transcriptC12D5.2b
C12D5.2c
C12D5.2a.1
Associated_featureWBsf646949
WBsf232000
WBsf232001
Transcription_factorWBTranscriptionFactor000957
Experimental_infoRNAi_resultWBRNAi00010642Inferred_automaticallyRNAi_primary
WBRNAi00040382Inferred_automaticallyRNAi_primary
WBRNAi00028820Inferred_automaticallyRNAi_primary
Expr_patternExpr7433
Expr1025788
Expr1036724
Expr1144444
Expr2014052
Expr2032292
Drives_constructWBCnstr00012576
WBCnstr00028636
Construct_productWBCnstr00028636
Microarray_results (16)
Expression_cluster (108)
InteractionWBInteraction000379604
WBInteraction000386596
WBInteraction000406858
WBInteraction000410615
WBInteraction000413493
WBInteraction000424433
WBInteraction000441058
Map_infoMapVPosition0.842026Error0.00174
PositivePositive_cloneC12D5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point5364
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene