WormBase Tree Display for Gene: WBGene00015650
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| WBGene00015650 | SMap | S_parent | Sequence | C09G4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pkg-2 | Person_evidence | WBPerson1640 | |||||
| Sequence_name | C09G4.2 | ||||||||
| Molecular_name | C09G4.2a | ||||||||
| C09G4.2a.1 | |||||||||
| CE31156 | |||||||||
| C09G4.2b | |||||||||
| CE49704 | |||||||||
| C09G4.2c | |||||||||
| CE31158 | |||||||||
| C09G4.2b.1 | |||||||||
| C09G4.2c.1 | |||||||||
| Other_name | CELE_C09G4.2 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | pkg-2 | ||||||||
| DB_info | Database (14) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Jul 2011 12:05:49 | WBPerson2970 | Name_change | CGC_name | pkg-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pkg | ||||||||
| Allele (205) | |||||||||
| Strain | WBStrain00031746 | ||||||||
| WBStrain00051005 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Ortholog (43) | |||||||||
| Paralog | WBGene00001173 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00002189 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00018569 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable ATP binding activity; cGMP binding activity; and cGMP-dependent protein kinase activity. Predicted to be involved in phosphorylation. Human ortholog(s) of this gene implicated in thoracic aortic aneurysm. Is an ortholog of human PRKG1 (protein kinase cGMP-dependent 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:14004 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9414) | ||||
| Molecular_info | Corresponding_CDS | C09G4.2a | |||||||
| C09G4.2b | |||||||||
| C09G4.2c | |||||||||
| Corresponding_CDS_history | C09G4.2b:wp242 | ||||||||
| C09G4.2d:wp242 | |||||||||
| Corresponding_transcript | C09G4.2a.1 | ||||||||
| C09G4.2b.1 | |||||||||
| C09G4.2c.1 | |||||||||
| Other_sequence (41) | |||||||||
| Associated_feature (28) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00103178 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00064591 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00010545 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040227 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020723 | ||||||||
| Expr1036703 | |||||||||
| Expr1144300 | |||||||||
| Expr2014948 | |||||||||
| Expr2033183 | |||||||||
| Drives_construct | WBCnstr00028685 | ||||||||
| Construct_product | WBCnstr00028685 | ||||||||
| Microarray_results (38) | |||||||||
| Expression_cluster (167) | |||||||||
| Interaction (18) | |||||||||
| Map_info | Map | IV | Position | 3.89584 | Error | 0.002792 | |||
| Positive | Positive_clone | C09G4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027258 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00039356 | |||||||||
| WBPaper00043457 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056790 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
