WormBase Tree Display for Gene: WBGene00015608
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WBGene00015608 | SMap | S_parent | Sequence | CHROMOSOME_II | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | math | ||||||
Allele (288) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (20) | |||||||
Paralog (85) | |||||||
Structured_description | Concise_description | The C08F1.4 gene encodes a protein closely similar to F36H5.2, which has a meprin-associated Traf homology (MATH) domain and may be involved in apoptosis. | Paper_evidence | WBPaper00004589 | |||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Enriched in head mesodermal cell; intestine; mechanosensory neurons; and pharyngeal muscle cell based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including skn-1; dpy-10; and hsf-1 based on microarray and RNA-seq studies. Is affected by eighteen chemicals including Ethanol; rotenone; and Tunicamycin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; and TRAF-like. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C08F1.4a | |||||
C08F1.4b | |||||||
Corresponding_transcript | C08F1.4a.1 | ||||||
C08F1.4a.2 | |||||||
C08F1.4a.3 | |||||||
C08F1.4b.1 | |||||||
Associated_feature | WBsf220876 | ||||||
Experimental_info (8) | |||||||
Map_info | Map | II | Position | -14.4399 | Error | 0.005013 | |
Positive | Positive_clone | C08F1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |