WormBase Tree Display for Gene: WBGene00015601
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WBGene00015601 | SMap | S_parent | Sequence | C08E3 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name (5) | |||||||
DB_info | Database | AceView | gene | 2B910 | |||
WormQTL | gene | WBGene00015601 | |||||
WormFlux | gene | WBGene00015601 | |||||
NDB | locus_tag | CELE_C08E3.9 | |||||
Panther | gene | CAEEL|WormBase=WBGene00015601|UniProtKB=O17200 | |||||
family | PTHR23015 | ||||||
NCBI | gene | 182401 | |||||
RefSeq | protein | NM_061613.5 | |||||
TREEFAM | TREEFAM_ID | TF321294 | |||||
TrEMBL | UniProtAcc | O17200 | |||||
UniProt_GCRP | UniProtAcc | O17200 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | fbxa | ||||||
Allele (89) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00029435 | ||||||
00029436 | |||||||
Contained_in_operon | CEOP2763 | ||||||
Ortholog (23) | |||||||
Paralog (222) | |||||||
Structured_description | Automated_description | Enriched in intestine and pharynx based on tiling array and RNA-seq studies. Is affected by several genes including skn-1; hsf-1; and rrf-3 based on microarray; tiling array; and RNA-seq studies. Is affected by thirteen chemicals including hydrogen sulfide; methylmercury hydroxide; and methylmercuric chloride based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Mos1 transposase, HTH domain; FTH domain; HTH domain in Mos1 transposase; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info (4) | |||||||
Experimental_info | RNAi_result | WBRNAi00028675 | Inferred_automatically | RNAi_primary | |||
WBRNAi00010453 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00040099 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1144167 | ||||||
Expr2011492 | |||||||
Expr2029729 | |||||||
Drives_construct | WBCnstr00028722 | ||||||
Construct_product | WBCnstr00028722 | ||||||
Microarray_results (13) | |||||||
Expression_cluster (176) | |||||||
Interaction (13) | |||||||
Map_info | Map | II | Position | -15.2397 | Error | 0.010825 | |
Positive | Positive_clone | C08E3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |