WormBase Tree Display for Gene: WBGene00015529
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| WBGene00015529 | SMap | S_parent | Sequence | C06E2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C06E2.5 | |||||||
| Molecular_name | C06E2.5 | ||||||||
| C06E2.5.1 | |||||||||
| CE30595 | |||||||||
| Other_name | CELE_C06E2.5 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | C06E2.5 | ||||||||
| DB_info | Database | AceView | gene | XJ476 | |||||
| WormQTL | gene | WBGene00015529 | |||||||
| WormFlux | gene | WBGene00015529 | |||||||
| NDB | locus_tag | CELE_C06E2.5 | |||||||
| NCBI | gene | 181133 | |||||||
| RefSeq | protein | NM_077099.5 | |||||||
| TrEMBL | UniProtAcc | Q17719 | |||||||
| UniProt_GCRP | UniProtAcc | Q17719 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (19) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00035726 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
| OMA | |||||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00154294 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| Inparanoid_8 | |||||||||
| WBGene00081164 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| Cni-C06E2.5 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
| FL83_02108 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
| GCK72_025221 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| Sp34_X0174000 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
| Sp34_X0206200 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
| chrX_pilon.g19655 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in Z1.p; Z4.a; intestine; male distal tip cell; and somatic gonad precursor based on RNA-seq and microarray studies. Is affected by several genes including daf-2; eat-2; and npr-1 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including rotenone; manganese chloride; and stavudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C06E2.5 | |||||||
| Corresponding_transcript | C06E2.5.1 | ||||||||
| Associated_feature | WBsf1006262 | ||||||||
| WBsf1006263 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00033314 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00039902 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00010311 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016517 | ||||||||
| Expr1036648 | |||||||||
| Expr1143979 | |||||||||
| Expr2000529 | |||||||||
| Expr2018755 | |||||||||
| Drives_construct | WBCnstr00028774 | ||||||||
| Construct_product | WBCnstr00028774 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (128) | |||||||||
| Interaction (49) | |||||||||
| Map_info | Positive | Positive_clone | C06E2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 0.424135 | |||||||
| Method | Gene |
