WormBase Tree Display for Gene: WBGene00015499
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| WBGene00015499 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | ints-1 | Paper_evidence | WBPaper00040589 | |||||
| Person_evidence | WBPerson5934 | ||||||||
| Sequence_name | C06A5.1 | ||||||||
| Molecular_name | C06A5.1 | ||||||||
| C06A5.1.1 | |||||||||
| CE45602 | |||||||||
| Other_name | let-384 | Person_evidence | WBPerson533 | ||||||
| inst-1 | |||||||||
| CELE_C06A5.1 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | ints-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Feb 2015 15:31:16 | WBPerson2970 | Event | Acquires_merge | WBGene00002604 | ||||
| Name_change | CGC_name | inst-1 | |||||||
| Other_name | let-384 | ||||||||
| 3 | 06 Feb 2019 15:00:59 | WBPerson1983 | Name_change | CGC_name | ints-1 | ||||
| Other_name | inst-1 | ||||||||
| 4 | 20 May 2019 14:10:26 | WBPerson1983 | Name_change | CGC_name | ints-1 | ||||
| Other_name | inst-1 | ||||||||
| Acquires_merge | WBGene00002604 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ints | ||||||||
| Allele (107) | |||||||||
| Legacy_information | [McDowall JS] Sterile adult | ||||||||
| [C.elegansII] h84 : late larval lethal or sterile adult. OA3: h388, h454, h865. [Howell et al. 1987; KR] | |||||||||
| Strain | WBStrain00023676 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00024744 | ||||||||
| 00024745 | |||||||||
| 00121395 | |||||||||
| 00121396 | |||||||||
| Contained_in_operon | CEOP1288 | ||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in U2 snRNA 3'-end processing. Predicted to be part of integrator complex. Human ortholog(s) of this gene implicated in neurodevelopmental disorder with cataracts, poor growth, and dysmorphic facies. Is an ortholog of human INTS1 (integrator complex subunit 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0070346 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:24555) | ||||
| Molecular_info | Corresponding_CDS | C06A5.1 | |||||||
| Corresponding_CDS_history | C06A5.1:wp221 | ||||||||
| Corresponding_transcript | C06A5.1.1 | ||||||||
| Other_sequence | CBC11935_1 | ||||||||
| Associated_feature | WBsf643327 | ||||||||
| WBsf656354 | |||||||||
| WBsf656355 | |||||||||
| WBsf217736 | |||||||||
| Experimental_info | RNAi_result (18) | ||||||||
| Expr_pattern | Expr1013059 | ||||||||
| Expr1036631 | |||||||||
| Expr1143897 | |||||||||
| Expr2012783 | |||||||||
| Expr2031022 | |||||||||
| Drives_construct | WBCnstr00028800 | ||||||||
| Construct_product | WBCnstr00028800 | ||||||||
| Regulate_expr_cluster | WBPaper00056284:ints-1(RNAi)_downregulated | ||||||||
| WBPaper00056284:ints-1(RNAi)_upregulated | |||||||||
| WBPaper00056284:ints-11(RNAi)_downregulated | |||||||||
| WBPaper00056284:ints-11(RNAi)_upregulated | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (108) | |||||||||
| Interaction (13) | |||||||||
| Map_info | Positive | Positive_clone | C06A5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Negative | Negative_clone | C27D2 | |||||||
| C32E7 | |||||||||
| C32G12 | |||||||||
| C40A4 | |||||||||
| C46H8 | |||||||||
| C48E7 | |||||||||
| Mapping_data | 2_point | 2548 | |||||||
| Multi_point | 1034 | ||||||||
| Pos_neg_data | 2697 | ||||||||
| 5545 | |||||||||
| 5546 | |||||||||
| 5547 | |||||||||
| 5548 | |||||||||
| 5700 | |||||||||
| 4187 | |||||||||
| Interpolated_map_position | I | 0.673481 | |||||||
| Reference (13) | |||||||||
| Remark | [McDowall JS] Extrachromosomal arrays containing three cosmids generated, then manipulated genetically. | ||||||||
| Method | Gene |
