WormBase Tree Display for Gene: WBGene00015477
expand all nodes | collapse all nodes | view schema
WBGene00015477 | SMap | S_parent | Sequence | C05D10 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | attf-4 | Person_evidence | WBPerson260 | |||
WBPerson1997 | |||||||
Sequence_name | C05D10.1 | ||||||
Molecular_name | C05D10.1a | ||||||
C05D10.1a.1 | |||||||
CE24783 | |||||||
C05D10.1b | |||||||
CE01124 | |||||||
C05D10.1c | |||||||
CE37698 | |||||||
C05D10.1b.1 | |||||||
C05D10.1c.1 | |||||||
Other_name | CELE_C05D10.1 | Accession_evidence | NDB | BX284603 | |||
Public_name | attf-4 | ||||||
DB_info | Database | AceView | gene | 3H173 | |||
WormQTL | gene | WBGene00015477 | |||||
WormFlux | gene | WBGene00015477 | |||||
NDB | locus_tag | CELE_C05D10.1 | |||||
Panther | gene | CAEEL|WormBase=WBGene00015477|UniProtKB=Q11178 | |||||
family | PTHR36522 | ||||||
NCBI | gene | 175858 | |||||
RefSeq | protein | NM_001379742.1 | |||||
NM_171147.7 | |||||||
NM_001379741.2 | |||||||
SwissProt | UniProtAcc | Q11178 | |||||
TREEFAM | TREEFAM_ID | TF321832 | |||||
UniProt_GCRP | UniProtAcc | Q11178 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | attf | ||||||
Allele (41) | |||||||
Strain | WBStrain00031990 | ||||||
WBStrain00030081 | |||||||
WBStrain00030082 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00057328 | ||||||
Ortholog (27) | |||||||
Structured_description | Automated_description | Predicted to enable DNA binding activity. Expressed in head muscle; hypodermis; pharyngeal-intestinal valve; tail neurons; and ventral nerve cord. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C05D10.1a | |||||
C05D10.1b | |||||||
C05D10.1c | |||||||
Corresponding_CDS_history | C05D10.1b:wp275 | ||||||
Corresponding_transcript | C05D10.1a.1 | ||||||
C05D10.1b.1 | |||||||
C05D10.1c.1 | |||||||
Other_sequence (13) | |||||||
Associated_feature (14) | |||||||
Gene_product_binds (151) | |||||||
Transcription_factor | WBTranscriptionFactor000952 | ||||||
Experimental_info | RNAi_result | WBRNAi00039719 | Inferred_automatically | RNAi_primary | |||
WBRNAi00010192 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00028487 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00005561 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern (12) | |||||||
Drives_construct | WBCnstr00014261 | ||||||
WBCnstr00014264 | |||||||
WBCnstr00015188 | |||||||
WBCnstr00028816 | |||||||
Construct_product | WBCnstr00016574 | ||||||
WBCnstr00016714 | |||||||
WBCnstr00028816 | |||||||
Microarray_results (29) | |||||||
Expression_cluster (122) | |||||||
Interaction (28) | |||||||
Map_info (3) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |