WormBase Tree Display for Gene: WBGene00015403
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WBGene00015403 | SMap | S_parent | Sequence | C03H5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name (5) | |||||||||
DB_info | Database | AceView | gene | 2A693 | |||||
WormQTL | gene | WBGene00015403 | |||||||
WormFlux | gene | WBGene00015403 | |||||||
NDB | locus_tag | CELE_C03H5.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00015403|UniProtKB=O16660 | |||||||
family | PTHR22991 | ||||||||
NCBI | gene | 173430 | |||||||
RefSeq | protein | NM_061324.9 | |||||||
TREEFAM | TREEFAM_ID | TF351663 | |||||||
TrEMBL | UniProtAcc | O16660 | |||||||
UniProt_GCRP | UniProtAcc | O16660 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 29 Apr 2005 13:53:45 | WBPerson2970 | Name_change | CGC_name | clec-10 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | clec | ||||||||
Allele (25) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (49) | |||||||||
Paralog (52) | |||||||||
Structured_description | Automated_description | Enriched in intestine based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray and RNA-seq studies. Is affected by twenty-seven chemicals including Heme; tryptophan; and D-glucose based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin fold; Spermadhesin, CUB domain superfamily; Lectin C-type domain; CUB domain; C-type lectin-like/link domain superfamily; and C-type lectin-like. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info (4) | |||||||||
Experimental_info | RNAi_result | WBRNAi00039558 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00010082 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1017137 | ||||||||
Expr1143660 | |||||||||
Expr2010054 | |||||||||
Expr2028295 | |||||||||
Drives_construct | WBCnstr00028870 | ||||||||
Construct_product | WBCnstr00028870 | ||||||||
Microarray_results (16) | |||||||||
Expression_cluster (285) | |||||||||
Interaction (48) | |||||||||
Map_info | Map | II | Position | -15.6118 | Error | 0.001187 | |||
Positive | Positive_clone | C03H5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |