WormBase Tree Display for Gene: WBGene00015403
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WBGene00015403 | SMap | S_parent | Sequence | C03H5 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | clec | ||||||
Allele (25) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (49) | |||||||
Paralog (52) | |||||||
Structured_description | Automated_description | Enriched in intestine based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray and RNA-seq studies. Is affected by twenty-seven chemicals including Heme; tryptophan; and D-glucose based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin fold; Spermadhesin, CUB domain superfamily; Lectin C-type domain; CUB domain; C-type lectin-like/link domain superfamily; and C-type lectin-like. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C03H5.1 | |||||
Corresponding_CDS_history | C03H5.1:wp87 | ||||||
Corresponding_transcript | C03H5.1.1 | ||||||
Associated_feature | WBsf717620 | ||||||
WBsf986401 | |||||||
WBsf986402 | |||||||
WBsf220754 | |||||||
WBsf220755 | |||||||
Experimental_info | RNAi_result | WBRNAi00039558 | Inferred_automatically | RNAi_primary | |||
WBRNAi00010082 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1017137 | ||||||
Expr1143660 | |||||||
Expr2010054 | |||||||
Expr2028295 | |||||||
Drives_construct | WBCnstr00028870 | ||||||
Construct_product | WBCnstr00028870 | ||||||
Microarray_results (16) | |||||||
Expression_cluster (285) | |||||||
Interaction (48) | |||||||
Map_info | Map | II | Position | -15.6118 | Error | 0.001187 | |
Positive | Positive_clone | C03H5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |