WormBase Tree Display for Gene: WBGene00015353
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| WBGene00015353 | SMap | S_parent | Sequence | C02F5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C02F5.13 | |||||||
| Molecular_name | C02F5.13 | ||||||||
| C02F5.13.1 | |||||||||
| CE36093 | |||||||||
| Other_name | CELE_C02F5.13 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | C02F5.13 | ||||||||
| DB_info | Database | AceView | gene | 3J337a | |||||
| WormQTL | gene | WBGene00015353 | |||||||
| WormFlux | gene | WBGene00015353 | |||||||
| NDB | locus_tag | CELE_C02F5.13 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015353|UniProtKB=P61228 | |||||||
| family | PTHR21016 | ||||||||
| NCBI | gene | 3565859 | |||||||
| RefSeq | protein | NM_001025967.2 | |||||||
| SwissProt | UniProtAcc | P61228 | |||||||
| TREEFAM | TREEFAM_ID | TF314896 | |||||||
| UniProt_GCRP | UniProtAcc | P61228 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (23) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00048718 | ||||||||
| 00048719 | |||||||||
| Contained_in_operon | CEOP3496 | ||||||||
| Ortholog (31) | |||||||||
| Paralog | WBGene00013446 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00014118 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00016567 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. Is an ortholog of human TM2D2 (TM2 domain containing 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C02F5.13 | |||||||
| Corresponding_transcript | C02F5.13.1 | ||||||||
| Other_sequence (30) | |||||||||
| Associated_feature | WBsf225379 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00006688 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00039445 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039444 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005800 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015414 | ||||||||
| Expr1036579 | |||||||||
| Expr1143560 | |||||||||
| Expr2000338 | |||||||||
| Expr2018562 | |||||||||
| Drives_construct | WBCnstr00028909 | ||||||||
| Construct_product | WBCnstr00028909 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (89) | |||||||||
| SAGE_tag | SAGE:acattcaatacacggaa | Strand | Antisense | ||||||
| SAGE:gaccaagaacgtttaca | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:gaccaagaac | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| Map_info | Positive | Positive_clone | C02F5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -0.353396 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
