WormBase Tree Display for Gene: WBGene00015143
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| WBGene00015143 | SMap | S_parent | Sequence | B0336 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | rbm-26 | Person_evidence | WBPerson260 | |||||
| Sequence_name | B0336.3 | ||||||||
| Molecular_name (12) | |||||||||
| Other_name | CELE_B0336.3 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | rbm-26 | ||||||||
| DB_info | Database | AceView | gene | 3G803 | |||||
| WormQTL | gene | WBGene00015143 | |||||||
| WormFlux | gene | WBGene00015143 | |||||||
| NDB | locus_tag | CELE_B0336.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015143|UniProtKB=A0A2K5ATS7 | |||||||
| family | PTHR14398 | ||||||||
| NCBI | gene | 175800 | |||||||
| RefSeq | protein | NM_001361714.4 | |||||||
| NM_001361715.4 | |||||||||
| NM_065833.5 | |||||||||
| NM_001361713.4 | |||||||||
| TrEMBL | UniProtAcc | A0A2K5ATS4 | |||||||
| A0A2K5ATS7 | |||||||||
| A0A2K5ATT0 | |||||||||
| Q10954 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A2K5ATS7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 07 Dec 2017 13:24:47 | WBPerson1983 | Name_change | CGC_name | rbm-26 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rbm | ||||||||
| Allele (52) | |||||||||
| Strain | WBStrain00001456 | ||||||||
| WBStrain00037037 | |||||||||
| In_cluster | conserved_RDE-1_cluster | ||||||||
| conserved_miRNA_siRNA_cluster | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00003091 | ||||||||
| 00003092 | |||||||||
| 00003093 | |||||||||
| 00003094 | |||||||||
| 00121125 | |||||||||
| 00121126 | |||||||||
| 00121127 | |||||||||
| Contained_in_operon | CEOP3332 | ||||||||
| Ortholog (39) | |||||||||
| Structured_description | Automated_description | Predicted to enable RNA binding activity. Predicted to be involved in mRNA processing. Predicted to be located in nucleus. Expressed in gonad; neurons; and tail. Is an ortholog of human RBM27 (RNA binding motif protein 27). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | B0336.3a | |||||||
| B0336.3b | |||||||||
| B0336.3c | |||||||||
| B0336.3d | |||||||||
| Corresponding_transcript | B0336.3a.1 | ||||||||
| B0336.3b.1 | |||||||||
| B0336.3c.1 | |||||||||
| B0336.3d.1 | |||||||||
| Other_sequence (17) | |||||||||
| Associated_feature | WBsf645200 | ||||||||
| WBsf658983 | |||||||||
| WBsf978566 | |||||||||
| WBsf992498 | |||||||||
| WBsf992499 | |||||||||
| WBsf1014939 | |||||||||
| WBsf224983 | |||||||||
| WBsf224984 | |||||||||
| WBsf224985 | |||||||||
| WBsf224986 | |||||||||
| Transcription_factor | WBTranscriptionFactor000946 | ||||||||
| Experimental_info | RNAi_result (17) | ||||||||
| Expr_pattern (14) | |||||||||
| Drives_construct | WBCnstr00002334 | ||||||||
| WBCnstr00012264 | |||||||||
| WBCnstr00012545 | |||||||||
| WBCnstr00015186 | |||||||||
| WBCnstr00015187 | |||||||||
| WBCnstr00029054 | |||||||||
| Construct_product | WBCnstr00029054 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (139) | |||||||||
| Interaction (21) | |||||||||
| Map_info | Map | III | Position | -1.44778 | |||||
| Positive | Positive_clone | B0336 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00029257 | ||||||||
| WBPaper00030963 | |||||||||
| WBPaper00034662 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041771 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00063946 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
