WormBase Tree Display for Gene: WBGene00015099
expand all nodes | collapse all nodes | view schema
WBGene00015099 | SMap | S_parent | Sequence | B0280 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | ggtb-1 | |||||||
Sequence_name | B0280.1 | ||||||||
Molecular_name | B0280.1a | ||||||||
B0280.1a.1 | |||||||||
CE24762 | |||||||||
B0280.1b | |||||||||
CE00735 | |||||||||
B0280.1b.1 | |||||||||
B0280.1b.2 | |||||||||
Other_name | CELE_B0280.1 | Accession_evidence | NDB | BX284603 | |||||
Public_name | ggtb-1 | ||||||||
DB_info | Database (12) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 08 Jan 2009 13:54:58 | WBPerson2970 | Name_change | CGC_name | ggtb-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ggtb | ||||||||
Allele (40) | |||||||||
Strain | WBStrain00001303 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (15) | |||||||||
Ortholog (36) | |||||||||
Paralog (2) | |||||||||
Structured_description | Automated_description | Predicted to enable small GTPase binding activity and zinc ion binding activity. Predicted to contribute to Rab geranylgeranyltransferase activity. Involved in PERK-mediated unfolded protein response. Predicted to be part of Rab-protein geranylgeranyltransferase complex. Expressed in head; intestine; and tail. Is an ortholog of human RABGGTB (Rab geranylgeranyltransferase subunit beta). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | B0280.1a | |||||||
B0280.1b | |||||||||
Corresponding_CDS_history | B0280.1b:wp151 | ||||||||
Corresponding_transcript | B0280.1a.1 | ||||||||
B0280.1b.1 | |||||||||
B0280.1b.2 | |||||||||
Other_sequence (54) | |||||||||
Associated_feature | WBsf645319 | ||||||||
WBsf225199 | |||||||||
Experimental_info (7) | |||||||||
Map_info | Map | III | Position | -0.787736 | Error | 0.0003 | |||
Positive | Positive_clone | B0280 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00018228 | ||||||||
WBPaper00030935 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00059604 | |||||||||
WBPaper00064071 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |