WormBase Tree Display for Gene: WBGene00015034
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| WBGene00015034 | SMap | S_parent | Sequence | B0207 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | B0207.11 | |||||||
| Molecular_name | B0207.11 | ||||||||
| B0207.11.1 | |||||||||
| CE44877 | |||||||||
| Other_name | CELE_B0207.11 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | B0207.11 | ||||||||
| DB_info | Database | AceView | gene | 1G538 | |||||
| WormQTL | gene | WBGene00015034 | |||||||
| WormFlux | gene | WBGene00015034 | |||||||
| NDB | locus_tag | CELE_B0207.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015034|UniProtKB=O01434 | |||||||
| family | PTHR31128 | ||||||||
| NCBI | gene | 181840 | |||||||
| RefSeq | protein | NM_059320.3 | |||||||
| TREEFAM | TREEFAM_ID | TF315835 | |||||||
| TrEMBL | UniProtAcc | O01434 | |||||||
| UniProt_GCRP | UniProtAcc | O01434 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (20) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (32) | |||||||||
| Paralog | WBGene00009321 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00009643 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00009705 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00013590 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00044684 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020377 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00015820 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | B0207.11 encodes a nematode-specific protein probably required for a normally high ovulation rate; B0207.11 has no obvious non-nematode homologs, but does have a putative N-terminal coiled-coil domain and an SH2 motif, and is is paralogous to four other C. elegans proteins (F42G4.6, F44F4.10, T08G11.2, and Y81G3A.1); B0207.11(tm322) hermaphrodites show abnormal egg-laying, retaining significantly fewer eggs than wild-type (perhaps due to a lowered ovulation rate) while retaining late-stage embryos; B0207.11 has no obvious phenotype in mass RNAi experiments, possibly because of genetic redundancy with its paralogs. | Paper_evidence | WBPaper00029335 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 23 Jul 2007 00:00:00 | ||||||||
| Automated_description | Enriched in germ line and in male based on proteomic and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on tiling array; microarray; and RNA-seq studies. Is affected by twelve chemicals including methylmercuric chloride; D-glucose; and metformin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | B0207.11 | |||||||
| Corresponding_CDS_history | B0207.11:wp214 | ||||||||
| Corresponding_transcript | B0207.11.1 | ||||||||
| Associated_feature | WBsf983804 | ||||||||
| WBsf1009885 | |||||||||
| WBsf219509 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00027981 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00094844 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038714 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027231 | ||||||||
| Expr1142923 | |||||||||
| Expr2018274 | |||||||||
| Drives_construct | WBCnstr00029140 | ||||||||
| Construct_product | WBCnstr00029140 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (126) | |||||||||
| Interaction | WBInteraction000163824 | ||||||||
| WBInteraction000310962 | |||||||||
| WBInteraction000387077 | |||||||||
| WBInteraction000407228 | |||||||||
| WBInteraction000521043 | |||||||||
| WBInteraction000548233 | |||||||||
| Map_info | Positive | Positive_clone | B0207 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 0.497697 | |||||||
| Reference | WBPaper00029335 | ||||||||
| WBPaper00030887 | |||||||||
| Method | Gene |
