WormBase Tree Display for Gene: WBGene00015013
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| WBGene00015013 | SMap | S_parent | Sequence | B0047 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | btb-3 | Person_evidence | WBPerson261 | |||||
| Sequence_name | B0047.2 | ||||||||
| Molecular_name | B0047.2 | ||||||||
| Other_name | CELE_B0047.2 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | btb-3 | ||||||||
| DB_info | Database | AceView | gene | 2C328 | |||||
| WormQTL | gene | WBGene00015013 | |||||||
| WormFlux | gene | WBGene00015013 | |||||||
| NDB | locus_tag | CELE_B0047.2 | |||||||
| NCBI | gene | 181825 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 07 Nov 2007 11:51:23 | WBPerson2970 | Name_change | CGC_name | btb-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0000336 | |||||||
| Gene_class | btb | ||||||||
| Allele (60) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00084621 | Caenorhabditis remanei | From_analysis | OMA | |||||
| WBGene00077082 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| WBGene00164812 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| WBGene00148403 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
| WBGene00154217 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
| WBGene00064428 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
| WBGene00094388 | Pristionchus pacificus | From_analysis | Inparanoid_8 | ||||||
| Paralog (19) | |||||||||
| Structured_description | Automated_description | Enriched in germ line; germline precursor cell; and head mesodermal cell based on RNA-seq studies. Is affected by several genes including elt-2; sir-2.1; and dcr-1 based on microarray and RNA-seq studies. Is affected by seven chemicals including hydrogen sulfide; stavudine; and Rifampin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS_history | B0047.2:wp104 | |||||||
| B0047.2:wp246 | |||||||||
| Corresponding_pseudogene | B0047.2 | ||||||||
| Associated_feature | WBsf222737 | ||||||||
| Experimental_info | Expr_pattern | Expr1028438 | |||||||
| Expr1142901 | |||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (69) | |||||||||
| Interaction | WBInteraction000138411 | ||||||||
| WBInteraction000150740 | |||||||||
| WBInteraction000178692 | |||||||||
| WBInteraction000320767 | |||||||||
| WBInteraction000360429 | |||||||||
| WBInteraction000396272 | |||||||||
| Map_info | Map | II | Position | -13.9531 | Error | 0.002516 | |||
| Positive | Positive_clone | B0047 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
