WormBase Tree Display for Gene: WBGene00015012
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| WBGene00015012 | SMap | S_parent | Sequence | CHROMOSOME_II | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | bath-20 | Person_evidence | WBPerson655 | |||||
| Sequence_name | B0047.1 | ||||||||
| Molecular_name | B0047.1 | ||||||||
| B0047.1.1 | |||||||||
| CE36680 | |||||||||
| B0047.1.2 | |||||||||
| Other_name | CELE_B0047.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | bath-20 | ||||||||
| DB_info | Database | WormQTL | gene | WBGene00015012 | |||||
| SignaLink | protein | WBGene00015012 | |||||||
| WormFlux | gene | WBGene00015012 | |||||||
| NDB | locus_tag | CELE_B0047.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015012|UniProtKB=Q3V5H9 | |||||||
| family | PTHR22743 | ||||||||
| NCBI | gene | 181824 | |||||||
| RefSeq | protein | NM_001393014.1 | |||||||
| TrEMBL | UniProtAcc | H2KY61 | |||||||
| UniProt_GCRP | UniProtAcc | H2KY61 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Aug 2005 16:08:42 | WBPerson2970 | Name_change | CGC_name | bath-20 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | bath | ||||||||
| Allele (106) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (71) | |||||||||
| Paralog (81) | |||||||||
| Structured_description | Automated_description | Enriched in germ line; germline precursor cell; and head mesodermal cell based on RNA-seq studies. Is affected by several genes including daf-2; skn-1; and eat-2 based on microarray and RNA-seq studies. Is affected by seven chemicals including rotenone; Alovudine; and Sodium Chloride based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; TRAF-like; SKP1/BTB/POZ domain superfamily; and BTB/POZ domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | B0047.1 | |||||||
| Corresponding_CDS_history | B0047.1:wp124 | ||||||||
| B0047.1:wp148 | |||||||||
| B0047.1b:wp274 | |||||||||
| Corresponding_transcript | B0047.1.1 | ||||||||
| B0047.1.2 | |||||||||
| Associated_feature | WBsf986864 | ||||||||
| WBsf986865 | |||||||||
| WBsf1011666 | |||||||||
| WBsf1011667 | |||||||||
| WBsf222736 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00038693 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00027969 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009569 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011394 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022708 | ||||||||
| Expr1142900 | |||||||||
| Expr2009538 | |||||||||
| Expr2027775 | |||||||||
| Drives_construct | WBCnstr00029160 | ||||||||
| Construct_product | WBCnstr00029160 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (102) | |||||||||
| Interaction (35) | |||||||||
| Map_info | Map | II | Position | -13.9592 | Error | 0.002426 | |||
| Positive | Positive_clone | B0047 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
