WormBase Tree Display for Gene: WBGene00014218
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WBGene00014218 | SMap | S_parent | Sequence | ZK1098 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | prp-40 | Person_evidence | WBPerson11752 | |||
Sequence_name | ZK1098.1 | ||||||
Molecular_name | ZK1098.1a | ||||||
ZK1098.1a.1 | |||||||
CE03847 | |||||||
ZK1098.1b | |||||||
CE46142 | |||||||
ZK1098.1c | |||||||
CE00362 | |||||||
ZK1098.1b.1 | |||||||
ZK1098.1c.1 | |||||||
Other_name | CELE_ZK1098.1 | Accession_evidence | NDB | BX284603 | |||
Public_name | prp-40 | ||||||
DB_info | Database (11) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | prp | ||||||
Allele (36) | |||||||
Possibly_affected_by | WBVar02157269 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (8) | |||||||
Contained_in_operon | CEOP3596 | ||||||
Ortholog (48) | |||||||
Structured_description | Concise_description | ZK1098.1 encodes a protein, with multiple WW/rsp5/WWP domains and FF domains, required for embryonic viability and for normally high rates of postembryonic growth. | Paper_evidence | WBPaper00005654 | |||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Predicted to enable RNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Located in nucleus. Expressed in several structures, including body wall musculature; gonad; and nervous system. Is an ortholog of human PRPF40A (pre-mRNA processing factor 40 homolog A). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | ZK1098.1a | |||||
ZK1098.1b | |||||||
ZK1098.1c | |||||||
Corresponding_transcript | ZK1098.1a.1 | ||||||
ZK1098.1b.1 | |||||||
ZK1098.1c.1 | |||||||
Other_sequence (55) | |||||||
Associated_feature | WBsf645494 | ||||||
WBsf659413 | |||||||
WBsf659414 | |||||||
WBsf659415 | |||||||
WBsf993716 | |||||||
WBsf993717 | |||||||
WBsf993718 | |||||||
WBsf1015626 | |||||||
WBsf225586 | |||||||
Experimental_info | RNAi_result (21) | ||||||
Expr_pattern | Expr9513 | ||||||
Expr15830 | |||||||
Expr1012317 | |||||||
Expr1036371 | |||||||
Expr1162531 | |||||||
Expr2008705 | |||||||
Expr2026939 | |||||||
Drives_construct | WBCnstr00029218 | ||||||
Construct_product | WBCnstr00014078 | ||||||
WBCnstr00029218 | |||||||
Microarray_results (23) | |||||||
Expression_cluster (102) | |||||||
Interaction (111) | |||||||
Map_info | Positive | Positive_clone | ZK1098 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | III | 0.577519 | |||||
Reference | WBPaper00035598 | ||||||
WBPaper00038444 | |||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
WBPaper00061804 | |||||||
WBPaper00063335 | |||||||
WBPaper00065227 | |||||||
Method | Gene |